FMO07501.5prime Sequence
170 bp (170 high quality bases) assembled on 2008-10-22
> FMO07501.5prime
CAGTCGACATGGCTGGCGAAGGCGAGAAACTGACCGGCCTGTCGAAAATC
TTCAATGGCACCACCATGAGCGGCCGTGCAAATGTGGCCAAGGCCACGTA
CGCCGTGATGGGCCTGCTGATCGCCTACCAGGTGCTGAAGCCCAAGAAGA
AGGCAAGCTTTCTAGACCAT
FMO07501.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Neb-cGP-RB | 987 | CG15304-RB | 116..259 | 9..152 | 720 | 100 | Plus |
| Neb-cGP-RA | 410 | CG15304-RA | 116..259 | 9..152 | 720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10460922..10460999 | 9..86 | 390 | 100 | Plus |
| X | 23542271 | X | 10461082..10461150 | 84..152 | 345 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:41:47 has no hits.
FMO07501.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:07:39 Download gff for
FMO07501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neb-cGP-RA | 108..251 | 9..152 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:54 Download gff for
FMO07501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neb-cGP-RA | 116..259 | 9..152 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:26:00 Download gff for
FMO07501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neb-cGP-RA | 116..259 | 9..152 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:26:00 Download gff for
FMO07501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10460915..10460996 | 1..83 | 95 | -> | Plus |
| X | 10461082..10461150 | 84..152 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:54 Download gff for
FMO07501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10354948..10355029 | 1..83 | 95 | -> | Plus |
| arm_X | 10355115..10355183 | 84..152 | 100 | | Plus |
