Clone FMO07504 Report

Search the DGRC for FMO07504

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:4
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7630-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07504.5prime Sequence

296 bp (296 high quality bases) assembled on 2008-10-22

> FMO07504.5prime
CAGTCGACATGTTGGTTAAGCACATTGTCAAGCAGGGGCTTCTGCTCAAG
AACGCTGGCGCTTTGTCGCGTGCCGCTTACCACGGTGGACATGGTCCCCA
CTCCACCATGAACGATCTGCCCGTGCCCGCTGGAGACTGGAAGGAGCAGC
ACAGCCAGAAGAACGCCAAGTACAATGCCGCGCTCATCACTGGCATTCTC
GTCCTGGCCGGCACTATTGGATTCGTGAAATCTTCTGGTATCATCCACTT
CAACTACTACGCGCCCAAGAGCCTGGACGCAAGCTTTCTAGACCAT

FMO07504.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG7630-RA 417 CG7630-RA 57..327 8..278 1355 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:44
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17425909..17426081 54..226 865 100 Plus
3L 28110227 3L 17426139..17426192 225..278 270 100 Plus
3L 28110227 3L 17425594..17425640 8..54 235 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:24:44 has no hits.

FMO07504.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:07:42 Download gff for FMO07504.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7630-RA 38..321 1..284 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:59 Download gff for FMO07504.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7630-RA 49..332 1..284 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:46 Download gff for FMO07504.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7630-RA 49..332 1..284 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:46 Download gff for FMO07504.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 17425586..17425640 1..54 92 -> Plus
3L 17425910..17426079 55..224 100 -> Plus
3L 17426139..17426197 225..284 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:59 Download gff for FMO07504.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17418686..17418740 1..54 92 -> Plus
arm_3L 17419010..17419179 55..224 100 -> Plus
arm_3L 17419239..17419297 225..284 96   Plus