FMO07506.5prime Sequence
284 bp (284 high quality bases) assembled on 2008-10-22
> FMO07506.5prime
CAGTCGACATGGCCAAGCTCGCAATTTGCATCCTCGTGTTCGCCCTGTTC
GCCTTGGCTCTGTCCGCCCGCGTCCCCCGTGAGGAATCCAATCCTGCCCA
AGAATTTCTTACCAAGGCCCAGGGTGATTTCAACGAATTCATTGAAAAGT
TGAAGGCGTTGGACGCGAAGAAGGTTGAGGGTCTCTTCAAGGATGGATTA
AATACCGTGCAGGAGGGTCTGCAAAAACTTAACGAAACATTTCTTCAGGC
ACCAGCCGCATCCACCGCAAGCTTTCTAGACCAT
FMO07506.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nplp2-RC | 452 | CG11051-RC | 66..323 | 9..266 | 1290 | 100 | Plus |
| Nplp2-RB | 610 | CG11051-RB | 224..481 | 9..266 | 1290 | 100 | Plus |
| Nplp2-RA | 452 | CG11051-RA | 66..323 | 9..266 | 1290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13356727..13356853 | 54..180 | 635 | 100 | Plus |
| 3L | 28110227 | 3L | 13357006..13357094 | 178..266 | 445 | 100 | Plus |
| 3L | 28110227 | 3L | 13356599..13356643 | 9..53 | 225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:32:25 has no hits.
FMO07506.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:07:43 Download gff for
FMO07506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nplp2-RA | 67..333 | 9..275 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:21 Download gff for
FMO07506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nplp2-RA | 66..332 | 9..275 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:37 Download gff for
FMO07506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nplp2-RA | 66..332 | 9..275 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:37 Download gff for
FMO07506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13357008..13357103 | 180..275 | 95 | | Plus |
| 3L | 13356599..13356643 | 9..53 | 100 | -> | Plus |
| 3L | 13356727..13356852 | 54..179 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:21 Download gff for
FMO07506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13349699..13349743 | 9..53 | 100 | -> | Plus |
| arm_3L | 13349827..13349952 | 54..179 | 100 | -> | Plus |
| arm_3L | 13350108..13350203 | 180..275 | 95 | | Plus |
