Clone FMO07508 Report

Search the DGRC for FMO07508

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:8
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG12859-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07508.5prime Sequence

365 bp (365 high quality bases) assembled on 2008-10-22

> FMO07508.5prime
CAGTCGACATGGTTTTGTCCAACGAGGAGCAGGAGTTCATTAAGCGCAAG
CACGAGGCGACGCTGAAGCTGCGCCAGGAGTTCCTCAAGCAGAGCTCCAA
TCCCTACCGCCATGCCACCGGCGAGGGCGGCACCGTTTTCGATGCGGGAT
TAGCCCGTTTCCAGGCGATGCGAGTCTCCAACTACGAACACTTCAAGCCC
ACCGGCAAATCCTTCCGCACGGGCCTTTTCGCCGTCGTCCTGCCGATTGC
CCTCTACGCCTGGGCTTTGAAGGCGGAGCGCGATGGACGCGAGGAGAAGT
ACAGGACTGGCCAGGTGGCCTACAAGGACCGCCAGTTCAAGTTCATCGCA
AGCTTTCTAGACCAT

FMO07508.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG12859-RA 477 CG12859-RA 70..408 9..347 1695 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:40
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14756794..14757003 138..347 1050 100 Plus
2R 25286936 2R 14756585..14756713 9..137 645 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:17:41 has no hits.

FMO07508.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:07:46 Download gff for FMO07508.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12859-RA 59..408 2..353 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:47 Download gff for FMO07508.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12859-RA 64..413 2..353 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:39 Download gff for FMO07508.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12859-RA 64..413 2..353 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:39 Download gff for FMO07508.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 14756579..14756713 2..137 97 -> Plus
2R 14756794..14757008 138..353 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:47 Download gff for FMO07508.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10644084..10644218 2..137 97 -> Plus
arm_2R 10644299..10644513 138..353 99   Plus