FMO07509.5prime Sequence
263 bp (263 high quality bases) assembled on 2008-10-22
> FMO07509.5prime
CAGTCGACATGTCCCGCAAAGAGGCCCTGTCGCAGTTCATCAATCAGATA
CACGGACGCCCCGTCGCCGTAAAGCTGAACAACGGCGTTGACTATCGAGG
TGTGCTGGCCTGTCTGGATGGCTACATGAACATCTGCCTGGAGCAGACGG
AGGAGTACGTGAATGGGCAGCTGAAGAACAAGTACGGCGACGCCTTCATC
CGCGGCAACAATGTCCTCTACATTTCCACGCAGAAGCGGAGGGTCGCAAG
CTTTCTAGACCAT
FMO07509.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:40:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9344-RA | 474 | CG9344-RA | 100..336 | 9..245 | 1185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:40:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20977315..20977462 | 98..245 | 740 | 100 | Plus |
2R | 25286936 | 2R | 20977155..20977248 | 9..102 | 470 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 21:40:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rt1c | 5443 | Rt1c RT1C 5443bp | 3044..3102 | 141..198 | 112 | 67.8 | Plus |
FMO07509.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:07:48 Download gff for
FMO07509.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9344-RA | 100..340 | 9..249 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:35:35 Download gff for
FMO07509.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9344-RA | 100..340 | 9..249 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:26 Download gff for
FMO07509.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9344-RA | 100..340 | 9..249 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:26 Download gff for
FMO07509.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20977155..20977245 | 9..99 | 100 | -> | Plus |
2R | 20977317..20977466 | 100..249 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:35:35 Download gff for
FMO07509.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16864660..16864750 | 9..99 | 100 | -> | Plus |
arm_2R | 16864822..16864971 | 100..249 | 98 | | Plus |