Clone FMO07511 Report

Search the DGRC for FMO07511

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:11
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCpr60D-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07511.5prime Sequence

305 bp (305 high quality bases) assembled on 2008-10-22

> FMO07511.5prime
CAGTCGACATGCTGAAATATAGCCTTATCTTTGCCCTTTTCGTCGTTTTG
GCCAGCTGCAGTGAGGAGGATCTGCAGGCGCAACTTCTGAAGTCGGAGAA
CCGCCAGAACCTGGATGGAGCTGGGCAGTTCCAGCATGAGATCACGGTCA
GCAATGGGATCCAAGTGAAAGCTCAAGGCAATGTGAACGGCATCCAGGGC
GAATACTTCCTTCCCGGCGAAGATGGCAAGCAAATTCGCGTGACTTACAC
CGCAGATGCAACCGGCTTCCATCCGAAGGTTGAAGAGGCAAGCTTTCTAG
ACCAT

FMO07511.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:21
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr60D-RB 581 CG30163-RB 19..297 9..287 1395 100 Plus
Cpr60D-RA 494 CG30163-RA 105..383 9..287 1395 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24662966..24663232 287..21 1335 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:24:20 has no hits.

FMO07511.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:07:35 Download gff for FMO07511.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr60D-RA 105..383 9..287 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:51 Download gff for FMO07511.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr60D-RA 105..383 9..287 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:34 Download gff for FMO07511.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr60D-RA 105..383 9..287 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:34 Download gff for FMO07511.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 24662966..24663232 21..287 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:51 Download gff for FMO07511.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20550489..20550755 21..287 100 <- Minus