FMO07513.5prime Sequence
302 bp (302 high quality bases) assembled on 2008-10-22
> FMO07513.5prime
CAGTCGACATGGCCAAGCGCACCAAGAAGGTTGGAATCGTTGGTAAATAT
GGTACCCGTTATGGTGCCTCCCTGCGTAAGATGGTCAAGAAGATGGAAAT
CACCCAGCACAGCAAGTACACTTGCTCCTTCTGCGGCAAGGACTCCATGA
AGCGCGCCGTTGTGGGCATCTGGTCCTGCAAGCGCTGCAAAAGGACCGTC
GCCGGTGGCGCCTGGGTGTACTCCACCACCGCCGCCGCCTCCGTGCGATC
CGCCGTCCGTCGTCTGCGTGAAACCAAGGAACAGGCAAGCTTTCTAGACC
AT
FMO07513.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL37A-RA | 511 | CG5827-RA | 84..359 | 9..284 | 1380 | 100 | Plus |
| RpL37A-RB | 583 | CG5827-RB | 156..431 | 9..284 | 1380 | 100 | Plus |
| RpL37A-RC | 705 | CG5827-RC | 127..402 | 9..284 | 1380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5071607..5071752 | 139..284 | 730 | 100 | Plus |
| 2L | 23513712 | 2L | 5071226..5071356 | 11..141 | 655 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:35:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 894..927 | 219..252 | 107 | 79.4 | Plus |
FMO07513.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:12:39 Download gff for
FMO07513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL37A-RB | 111..396 | 1..288 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:55 Download gff for
FMO07513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL37A-RC | 120..405 | 1..288 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:30 Download gff for
FMO07513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL37A-RC | 120..405 | 1..288 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:30 Download gff for
FMO07513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5071218..5071355 | 1..140 | 97 | -> | Plus |
| 2L | 5071609..5071755 | 141..288 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:55 Download gff for
FMO07513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5071218..5071355 | 1..140 | 97 | -> | Plus |
| arm_2L | 5071609..5071755 | 141..288 | 98 | | Plus |
