FMO07514.5prime Sequence
389 bp (389 high quality bases) assembled on 2008-10-22
> FMO07514.5prime
TTCTGGCTATCGTTGCCTGCGCTGCTGCCAAGCCTGGACTTCTGGGTGCT
CCCCTTGCTTACACTGCTCCTCTGGCTTACTCTGCTCCTCTGGCTTACTC
AGCTCCTGCTGCCGTGGTAGCTGCTCCCGCTCCAGTTGTGACCGCCACCA
GTAGCCAGGTTATCGCCAGGAACTACAATGGAATCGCCGCTGCTCCTGTG
ATTGCTCCCGTTGCCGCTCCTGTGGTGGCCAAGTACGCTGCTGCTCCATT
GGCTGCTCCTGTGGTGGCGAAGTACGCGGCTACTCCTCTAGCTGCACCAC
TGGCCTACTCCTCGCCTTTGGCTTACTCCGCACCACTGAGCTACGCCGTT
CCATCTGCACCGCTCCTTATCGCAAGCTTTCTAGACCAT
FMO07514.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12519-RB | 600 | CG12519-RB | 75..445 | 1..371 | 1855 | 100 | Plus |
| CG12519-RA | 507 | CG12519-RA | 75..445 | 1..371 | 1855 | 100 | Plus |
| CG18294-RA | 507 | CG18294-RA | 77..362 | 1..286 | 1370 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19472620..19472990 | 1..371 | 1855 | 100 | Plus |
| 3L | 28110227 | 3L | 19475162..19475447 | 286..1 | 1370 | 98.6 | Minus |
| 3L | 28110227 | 3L | 19466706..19466952 | 247..1 | 1205 | 99.2 | Minus |
| 3L | 28110227 | 3L | 19471757..19472096 | 346..1 | 1060 | 87.7 | Minus |
| 3L | 28110227 | 3L | 19475971..19476310 | 1..346 | 1060 | 87.7 | Plus |
| 3L | 28110227 | 3L | 19478373..19478568 | 11..206 | 740 | 91.8 | Plus |
| 3L | 28110227 | 3L | 19423849..19424044 | 11..206 | 725 | 91.3 | Plus |
| 3L | 28110227 | 3L | 19467481..19467687 | 1..225 | 700 | 88.4 | Plus |
| 3L | 28110227 | 3L | 19488045..19488278 | 11..253 | 610 | 84.4 | Plus |
| 3L | 28110227 | 3L | 19467674..19467806 | 239..371 | 530 | 93.2 | Plus |
| 3L | 28110227 | 3L | 19422979..19423224 | 371..109 | 375 | 77.9 | Minus |
| 3L | 28110227 | 3L | 19486803..19486900 | 370..272 | 355 | 92.9 | Minus |
| 3L | 28110227 | 3L | 19477672..19477760 | 371..283 | 340 | 92.1 | Minus |
| 3L | 28110227 | 3L | 19475123..19475206 | 286..203 | 315 | 91.7 | Minus |
| 3L | 28110227 | 3L | 19424757..19424836 | 121..200 | 310 | 92.5 | Plus |
| 3L | 28110227 | 3L | 19471847..19471903 | 295..239 | 240 | 94.7 | Minus |
| 3L | 28110227 | 3L | 19476164..19476220 | 239..295 | 240 | 94.7 | Plus |
| 3L | 28110227 | 3L | 19464433..19464518 | 205..120 | 220 | 83.7 | Minus |
| 3L | 28110227 | 3L | 19475117..19475167 | 253..203 | 180 | 90.2 | Minus |
Blast to na_te.dros performed 2014-11-28 19:19:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2777..2849 | 139..64 | 147 | 69.7 | Minus |
FMO07514.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:12:40 Download gff for
FMO07514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12519-RA | 73..449 | 1..379 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:40 Download gff for
FMO07514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12519-RA | 75..451 | 1..379 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:39 Download gff for
FMO07514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12519-RA | 75..451 | 1..379 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:39 Download gff for
FMO07514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19472620..19472996 | 1..379 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:40 Download gff for
FMO07514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19465720..19466096 | 1..379 | 98 | | Plus |
