Clone FMO07517 Report

Search the DGRC for FMO07517

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:17
Vector:pMK33-CFH-BD
Associated Gene/TranscriptNplp3-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07517.5prime Sequence

296 bp (296 high quality bases) assembled on 2008-10-22

> FMO07517.5prime
CAGTCGACATGTTCAAGCTGTGCGTCTTCGTTGCTCTCCTTAGCCTGGCT
GCTGCTGCCCCAGCTCCCGCTCCTGCTCCTGCTCCTGCTCCTGGTCTCAT
TGGCCCTGGCATTGTGGCACCTGGAATCTGGGGACCCACCGTTGTCGGAT
CTCCTCTGCTTGCTCCTCAGGTGGTGAGCGTGGTGCCCGGTGCCATTTCT
CATGCTGCCATCACCCAGGTGCATCCTTCTCCTCTGCTGATCAAGAGCGT
CCATGGCCTGGGACCAGTTGTGATCGGTGCAAGCTTTCTAGACCAT

FMO07517.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:55
Subject Length Description Subject Range Query Range Score Percent Strand
Nplp3-RA 538 CG13061-RA 35..304 9..278 1350 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16318198..16318456 20..278 1295 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:41:55 has no hits.

FMO07517.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:12:43 Download gff for FMO07517.5prime
Subject Subject Range Query Range Percent Splice Strand
Nplp3-RA 34..306 9..282 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:59 Download gff for FMO07517.5prime
Subject Subject Range Query Range Percent Splice Strand
Nplp3-RA 35..307 9..282 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:26:05 Download gff for FMO07517.5prime
Subject Subject Range Query Range Percent Splice Strand
Nplp3-RA 35..307 9..282 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:26:05 Download gff for FMO07517.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 16318199..16318459 21..282 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:59 Download gff for FMO07517.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16311299..16311559 21..282 99   Plus