FMO07520.5prime Sequence
239 bp (239 high quality bases) assembled on 2008-10-22
> FMO07520.5prime
CAGTCGACATGAATCAATGGAGTTGCCATATCAACGGTCCGGTGACTAAG
CTCAACCTCTCAACCTCGACCTCAGCCTCAGTCCTTCTACCTACTACCTA
CTACCTACTACCTCTCACTATCCCCAGTAGTACGACATCCTGGCCCCCAA
AAACCACGGACATTACGACGCACACATCCTGCGACAGACACACGGCGCCC
CAACATTTCCCACATTTTCAAGCAAGCTTTCTAGACCAT
FMO07520.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33181-RF | 4113 | CG32714-RF | 274..486 | 9..221 | 1065 | 100 | Plus |
| CG33181-RI | 3920 | CG33181-RI | 176..371 | 26..221 | 980 | 100 | Plus |
| CG33181-RH | 4107 | CG33181-RH | 285..480 | 26..221 | 980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8509455..8509651 | 25..221 | 985 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:41:19 has no hits.
FMO07520.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:05:45 Download gff for
FMO07520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33181-RF | 268..488 | 1..225 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:34 Download gff for
FMO07520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33181-RF | 269..489 | 1..225 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:25:44 Download gff for
FMO07520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33181-RF | 269..489 | 1..225 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:25:44 Download gff for
FMO07520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8509456..8509654 | 26..225 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:34 Download gff for
FMO07520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8403489..8403687 | 26..225 | 99 | | Plus |
