FMO07521.5prime Sequence
314 bp (314 high quality bases) assembled on 2008-10-22
> FMO07521.5prime
CAGTCGACATGGCAGATGAACAACCAAATCTTGTGGCCGGACACCCACCT
GCATTGAAGGCTGGTGGCATGCGAATTGTGCAGCACAAAGCGCCGACGGC
AGAACGCGCGCCCAAGGATGCAGAGGATTGTACTGGACTGACACAACCCA
TTGCCGTGAACTCCGGCTCTGTGAGCGGTGCCCCCGTCAAGGGCAACACG
GACTTTACGCCCGCCTCCGCCCAGGTGGCCCACTCGCCCAAGCCACCGGC
TGCAGTGCAGCAGAAGCCCCAGATCCACATCCAGCAGCCACGGAAGGCAA
GCTTTCTAGACCAT
FMO07521.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12384-RA | 612 | CG12384-RA | 108..395 | 9..296 | 1440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11358119..11358271 | 296..144 | 765 | 100 | Minus |
| 2R | 25286936 | 2R | 11358336..11358424 | 143..55 | 445 | 100 | Minus |
| 2R | 25286936 | 2R | 11358958..11359003 | 54..9 | 230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:35:48 has no hits.
FMO07521.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:05:47 Download gff for
FMO07521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12384-RA | 77..378 | 1..302 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:28 Download gff for
FMO07521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12384-RA | 100..401 | 1..302 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:24 Download gff for
FMO07521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12384-RA | 100..401 | 1..302 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:24 Download gff for
FMO07521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11358113..11358271 | 144..302 | 98 | <- | Minus |
| 2R | 11358336..11358424 | 55..143 | 100 | <- | Minus |
| 2R | 11358958..11359011 | 1..54 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:28 Download gff for
FMO07521.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7245618..7245776 | 144..302 | 98 | <- | Minus |
| arm_2R | 7245841..7245929 | 55..143 | 100 | <- | Minus |
| arm_2R | 7246463..7246516 | 1..54 | 92 | | Minus |
