Clone FMO07522 Report

Search the DGRC for FMO07522

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:22
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7646-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07522.5prime Sequence

260 bp (260 high quality bases) assembled on 2008-10-22

> FMO07522.5prime
CAGTCGACATGTACGATGTCGATGGCAATGGTGTTATAGACATACAAGAA
ATGACCAAAATTGTTCAGGCAATTTATGACATGCTAGGAGCGTGCTCATC
TAATCGTCCAGCTGATTCAGCAGAAGAAAGAGCAAAAAATATTTTTGCAA
AAATGGACGAAAATAACGATGGTCAATTAACCCAAGATGAGTTCTTGAAA
GGATGCTTGCAAGATGAGGAGTTGTCAAAAATGTTGGCACCAGCAAGCTT
TCTAGACCAT

FMO07522.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG7646-RC 1696 CG7646-RC 996..1229 9..242 1170 100 Plus
CG7646-RB 627 CG7646-RB 284..517 9..242 1170 100 Plus
CG7646-RA 970 CG7646-RA 627..860 9..242 1170 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19995625..19995802 65..242 890 100 Plus
3L 28110227 3L 19995443..19995503 9..69 305 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:25:12 has no hits.

FMO07522.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:12:35 Download gff for FMO07522.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7646-RA 318..561 1..246 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:08 Download gff for FMO07522.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7646-RA 620..863 1..246 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:59 Download gff for FMO07522.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7646-RA 620..863 1..246 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:59 Download gff for FMO07522.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 19995436..19995502 1..68 95 -> Plus
3L 19995629..19995805 69..246 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:08 Download gff for FMO07522.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19988536..19988602 1..68 95 -> Plus
arm_3L 19988729..19988905 69..246 98   Plus