Clone FMO07523 Report

Search the DGRC for FMO07523

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:23
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG12483-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07523.5prime Sequence

290 bp (290 high quality bases) assembled on 2008-10-22

> FMO07523.5prime
CAGTCGACATGAAACTGGCAATGTTGTCCTGGATTACTTGGGTGATGCTT
CGGAGCATCGCAGAGGCTCAAGTTCCAGATCAACCCGAGGCTATGGGTGC
CGCCCAAGGGGGCTTGGGCGCAGCGGCGGGGGCGGGCGGACAATTTGGAG
CTCACGGCGGCGGAGCGGCTAAAGCCGTTGAGGACGGACCTGGAGCTGGG
ATGGACGTCGGCATTGGAGCGGGCGCCGAGGTGGGTGGGAGTGCTCGTGC
CGGAGGCGCTGGACGTAGACGCGCAAGCTTTCTAGACCAT

FMO07523.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG12483-RA 608 CG12483-RA 47..310 9..272 1320 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 97926..98145 272..53 1100 100 Minus
3L 28110227 3L 98285..98329 53..9 225 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:35:18 has no hits.

FMO07523.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:12:36 Download gff for FMO07523.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12483-RA 43..306 9..272 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:53 Download gff for FMO07523.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12483-RA 47..310 9..272 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:29 Download gff for FMO07523.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12483-RA 47..310 9..272 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:29 Download gff for FMO07523.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 97926..98144 54..272 100 <- Minus
3L 98285..98329 9..53 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:53 Download gff for FMO07523.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 97926..98144 54..272 100 <- Minus
arm_3L 98285..98329 9..53 100   Minus