Clone FMO07524 Report

Search the DGRC for FMO07524

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:24
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG30458-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07524.5prime Sequence

479 bp (479 high quality bases) assembled on 2008-10-22

> FMO07524.5prime
CCCATTATACGAAGTTATCAGTCGACATGAAATTCCTTATCATTGCCGTC
GCCTTCTTGGCCTGCGCCTACGCTGATGTTTCCGAGCCGGCTGCCGGAGG
ATACGATTACCCCCAGCCCGCTCCACCGGCGCCTGTGAAGAGCTACATTC
CCCCACCGCCACCACCACCCCCACCAGCACCCAAGAACACCTACATTCCT
CCCCCGGCTGCTCCTGCCAAGGCCTACATCCCACCCCCACCACCACCACC
ACCACCGGCGCCAAAGAACACCTACATCCCTCCAGCACCGGCTCCAGTTG
CTCCCGTGGAGACCTACATCCCTCCCGCAGCCCCAGCCCCCGCCTACATC
CCACCCGCTCCTGTCCAGGCCGAGGAGCCCATCATCGAGGAGATCGAGCA
GCCAGCCCAGGACGGCTACCGCTACAAGACCGTCCGTCGCCGCGTCTTCC
GTCACCGCAACGCAAGCTTTCTAGACCAT

FMO07524.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG30458-RA 614 CG30458-RA 57..491 27..461 2175 100 Plus
CG17290-RC 2443 CG17290-RC 259..450 270..461 660 89.6 Plus
CG17290-RA 440 CG17290-RA 151..342 270..461 660 89.6 Plus
CG17290-RC 2443 CG17290-RC 153..214 26..87 205 88.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17158448..17158880 461..29 2165 100 Minus
2R 25286936 2R 17154941..17155132 270..461 660 89.6 Plus
2R 25286936 2R 17154838..17154896 29..87 190 88.1 Plus
Blast to na_te.dros performed on 2014-11-28 19:14:28 has no hits.

FMO07524.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:12:37 Download gff for FMO07524.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30458-RA 42..488 18..466 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:30 Download gff for FMO07524.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30458-RA 49..495 18..466 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:19 Download gff for FMO07524.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30458-RA 49..495 18..466 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:19 Download gff for FMO07524.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17158444..17158885 22..466 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:30 Download gff for FMO07524.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13045949..13046390 22..466 98   Minus