Clone FMO07525 Report

Search the DGRC for FMO07525

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:25
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11825-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07525.5prime Sequence

340 bp (340 high quality bases) assembled on 2008-10-22

> FMO07525.5prime
CTATACGAAGTTATCAGTCGACATGAGTTCCAATTCTCTATTCGAAACCG
ACGAAGATGTCGCTCAGGCAAACAAGTTATCCCGAAAAGTGAAGGAGTCC
CCCTTTATGCTGGTGGGTATTGCCGGATTCGTGGCCGCAGGTTTGATTGG
AGCCTACAAATATCGGAACCGAGGCAGCATGAGCACCAGCGTCTTTCTGA
TGCAGTTGCGTGTGGCTGCCCAGGGAACCGTCGTTGGATGTTTGACAGCC
GGATTGGCGTACACCATGGCCAAGGAGTACCTGCTCCACGAGGAACCGAA
AAGCAATACCAGGCCAGACGAAGCAAGCTTTCTAGACCAT

FMO07525.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG11825-RC 1218 CG11825-RC 687..986 23..322 1500 100 Plus
CG11825-RA 598 CG11825-RA 67..366 23..322 1500 100 Plus
CG11825-RD 1068 CG11825-RD 569..836 55..322 1340 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10420704..10421003 322..23 1500 100 Minus
3R 32079331 3R 11242837..11243014 293..116 500 85.4 Minus
3R 32079331 3R 11243780..11243875 118..23 210 81.2 Minus
Blast to na_te.dros performed on 2014-11-28 18:59:38 has no hits.

FMO07525.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:05:52 Download gff for FMO07525.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11825-RA 60..367 18..326 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:20 Download gff for FMO07525.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11825-RA 62..369 18..326 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:13 Download gff for FMO07525.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11825-RA 62..369 18..326 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:13 Download gff for FMO07525.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 10420700..10421008 18..326 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:20 Download gff for FMO07525.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6308205..6308513 18..326 98   Minus