FMO07525.5prime Sequence
340 bp (340 high quality bases) assembled on 2008-10-22
> FMO07525.5prime
CTATACGAAGTTATCAGTCGACATGAGTTCCAATTCTCTATTCGAAACCG
ACGAAGATGTCGCTCAGGCAAACAAGTTATCCCGAAAAGTGAAGGAGTCC
CCCTTTATGCTGGTGGGTATTGCCGGATTCGTGGCCGCAGGTTTGATTGG
AGCCTACAAATATCGGAACCGAGGCAGCATGAGCACCAGCGTCTTTCTGA
TGCAGTTGCGTGTGGCTGCCCAGGGAACCGTCGTTGGATGTTTGACAGCC
GGATTGGCGTACACCATGGCCAAGGAGTACCTGCTCCACGAGGAACCGAA
AAGCAATACCAGGCCAGACGAAGCAAGCTTTCTAGACCAT
FMO07525.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11825-RC | 1218 | CG11825-RC | 687..986 | 23..322 | 1500 | 100 | Plus |
CG11825-RA | 598 | CG11825-RA | 67..366 | 23..322 | 1500 | 100 | Plus |
CG11825-RD | 1068 | CG11825-RD | 569..836 | 55..322 | 1340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10420704..10421003 | 322..23 | 1500 | 100 | Minus |
3R | 32079331 | 3R | 11242837..11243014 | 293..116 | 500 | 85.4 | Minus |
3R | 32079331 | 3R | 11243780..11243875 | 118..23 | 210 | 81.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:59:38 has no hits.
FMO07525.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:05:52 Download gff for
FMO07525.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11825-RA | 60..367 | 18..326 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:20 Download gff for
FMO07525.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11825-RA | 62..369 | 18..326 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:13 Download gff for
FMO07525.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11825-RA | 62..369 | 18..326 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:13 Download gff for
FMO07525.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10420700..10421008 | 18..326 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:20 Download gff for
FMO07525.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6308205..6308513 | 18..326 | 98 | | Minus |