Clone FMO07528 Report

Search the DGRC for FMO07528

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:28
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31360-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07528.5prime Sequence

320 bp (320 high quality bases) assembled on 2008-10-22

> FMO07528.5prime
CAGTCGACATGATCGGTAGACTTTCTTTTTGGAACAAGGACAACGTTTCC
AACGAGGTGGACTGCTTGGCCTGCCGTCTGGTCAGTGGCCTTGGACTCCT
GGGAATTGGTGCCTTCCTATTGGCACAGTCGAAAAAAAGACAAGCGAAAC
CTCTGGAGAATTTCACTATGAAAGGCTTGGCTGCAGCCGTTGGAGTTCTG
GGCGTGGCCCGCCTGGCAGACGCGAATTTCCTGAAGGCAACCGCCGAGAA
GCCAAAAGAACAGGAAAATACTAGCACTGATCATCAGTTCTTTTCTAGAC
GTGCAAGCTTTCTAGACCAT

FMO07528.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG31360-RA 649 CG31360-RA 77..370 9..302 1470 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17685173..17685350 9..186 890 100 Plus
3R 32079331 3R 17685411..17685528 185..302 590 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:36:12 has no hits.

FMO07528.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:05:55 Download gff for FMO07528.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31360-RA 72..370 9..310 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:36 Download gff for FMO07528.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31360-RA 77..375 9..310 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:35 Download gff for FMO07528.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31360-RA 77..375 9..310 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:35 Download gff for FMO07528.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 17685173..17685350 9..186 100 -> Plus
3R 17685413..17685533 187..310 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:36 Download gff for FMO07528.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13510895..13511072 9..186 100 -> Plus
arm_3R 13511135..13511255 187..310 96   Plus