Clone FMO07531 Report

Search the DGRC for FMO07531

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:31
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13220-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07531.5prime Sequence

485 bp (485 high quality bases) assembled on 2008-10-22

> FMO07531.5prime
CAGTCGACATGGCCGGGACACAGTCAAAAGACGCCTGCAGCATATGCGAC
AAAGTGGGCCTCAAGCCCTTCACCCGGGATAATGTGTTCAACTACTACAT
ACCGCTGCACGGCCTGGTGAGCTACGGAGCCCTTGCGGTGAATGTTATGA
ACCCCCAGATCGTGCCCAAAATCCTGCCCAAGAAGGACCTGACGAACGTG
TTCCTCATCTCCGCGGTGGTGGGCAGTGCCTTCTACATTTACGGCAGGCC
CCACCTGAAGGACGTGAAGAACAACAAGCGAGGTGCGTACGCCCTGCTGG
GCGCCACCCTATTCTCCATGGGATCCGTTCTGGCCTGGGCGCTCATCAAG
TCCGCCCTGCCACAGGACAATGCACTGCTGGCGACCCTGGCGGGCTTGGG
AACTGGCGCCGCCATCGTGAAGGTCGGCACTGATTACATTCAGGACGTGG
ATAAGCTGCAGAAGAACGCAAGCTTTCTAGACCAT

FMO07531.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG13220-RB 816 CG13220-RB 216..674 9..467 2295 100 Plus
CG13220-RA 685 CG13220-RA 85..543 9..467 2295 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11284498..11284956 9..467 2295 100 Plus
Blast to na_te.dros performed on 2014-11-28 23:09:21 has no hits.

FMO07531.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:06:00 Download gff for FMO07531.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13220-RA 83..541 9..467 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:18:21 Download gff for FMO07531.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13220-RA 85..543 9..467 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:51:47 Download gff for FMO07531.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13220-RA 85..543 9..467 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:51:47 Download gff for FMO07531.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 11284498..11284956 9..467 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:18:21 Download gff for FMO07531.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7172003..7172461 9..467 100   Plus