FMO07532.5prime Sequence
326 bp (326 high quality bases) assembled on 2008-10-22
> FMO07532.5prime
CAGTCGACATGGAGCAGCAACTGGAGAAAGTCCTAGCGGAAATCGCCGCA
CGGCAGGACACAGTGGGAGCTCTGCTGGCCAATCGCCAGGGATTGTGTTT
GGGCACCAAAGGAGACATTGATCCGAACGTGTCCGGCATCGGAATGGCCA
TTTCCGAGCAGGTGGCCAAACTGGAGCTGAATGCCACGGCTCCTGCAACG
ATTTGCCTTTACAGCGGAAACAAACGCTGTGTCATCCAGAAGGACGGCGA
GATCACAGGCGTTATCTTCAAGCAGCCGACGGGTACATCGGCGACCGCCC
CCAGCAACGCAAGCTTTCTAGACCAT
FMO07532.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14812-RB | 802 | CG14812-RB | 69..369 | 8..308 | 1505 | 100 | Plus |
| CG14812-RA | 720 | CG14812-RA | 69..369 | 8..308 | 1505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1858561..1858678 | 223..106 | 590 | 100 | Minus |
| X | 23542271 | X | 1858322..1858406 | 308..224 | 425 | 100 | Minus |
| X | 23542271 | X | 1858736..1858797 | 105..44 | 310 | 100 | Minus |
| X | 23542271 | X | 1858868..1858903 | 43..8 | 180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:13:24 has no hits.
FMO07532.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:06:01 Download gff for
FMO07532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14812-RA | 42..352 | 1..312 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:13 Download gff for
FMO07532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14812-RA | 87..397 | 1..312 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:48 Download gff for
FMO07532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14812-RA | 62..372 | 1..312 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:48 Download gff for
FMO07532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1858319..1858406 | 224..312 | 97 | <- | Minus |
| X | 1858561..1858678 | 106..223 | 100 | <- | Minus |
| X | 1858736..1858797 | 44..105 | 100 | <- | Minus |
| X | 1858868..1858907 | 1..43 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:13 Download gff for
FMO07532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1752352..1752439 | 224..312 | 97 | <- | Minus |
| arm_X | 1752594..1752711 | 106..223 | 100 | <- | Minus |
| arm_X | 1752769..1752830 | 44..105 | 100 | <- | Minus |
| arm_X | 1752901..1752940 | 1..43 | 93 | | Minus |
