FMO07546.5prime Sequence
527 bp (527 high quality bases) assembled on 2008-10-22
> FMO07546.5prime
CAGTCGACATGGGCCAAGCAAAGAAAGTCTCCTCCGCCTTGAGCAAGCTC
TTCGTGTACGGCGCCCTCAAGTACGGACAGCCCAGCAACTCAATCCTGGC
CAGCTCTGGCAACGGCTTCGCTAAGTTCTGGTGCAAGGCGACCACCACCC
AAAAGCTGCCGCTAGTGATCGCCACCCGCTACAACATTCCCTTCCTGCTG
AACAAGCCCGGAGTGGGATATTACGTAACAGGGGAGATCTACGAGGTGGA
CGATCGAATGCTGAATTCCCTGGACAACCTGGAGGATTGCGAGGAGATCT
ACACTCGCGAGATGCACGATATGAACATTGGCGTTGGAGAAGGAACCGTT
CCATGCTGGGTGTACCTGCTGCAGAAGTACCCGGAGAACCTACTTAGTCT
GCGCTACTTGTCCAGCTACGAGAACTCAACCACCCATCCATACATTATGC
GCCATCGCCGCACCCACAAGCATCCGGCCCAGGACGACCTCACCTACGAG
GCCCAGAACGCAAGCTTTCTAGACCAT
FMO07546.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tina-1-RA | 914 | CG2803-RA | 150..650 | 9..509 | 2505 | 100 | Plus |
| Tina-1-RB | 1429 | CG2803-RB | 678..1165 | 22..509 | 2440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24941122..24941443 | 343..22 | 1610 | 100 | Minus |
| 2R | 25286936 | 2R | 24940889..24941055 | 509..343 | 835 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:59:40 has no hits.
FMO07546.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:06:04 Download gff for
FMO07546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tina-1-RA | 141..649 | 2..513 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:23 Download gff for
FMO07546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tina-1-RA | 145..653 | 2..513 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:14 Download gff for
FMO07546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tina-1-RA | 145..653 | 2..513 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:14 Download gff for
FMO07546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24940886..24941054 | 344..513 | 98 | <- | Minus |
| 2R | 24941122..24941441 | 24..343 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:23 Download gff for
FMO07546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20828645..20828964 | 24..343 | 100 | <- | Minus |
| arm_2R | 20828409..20828577 | 344..513 | 98 | <- | Minus |
