Clone FMO07550 Report

Search the DGRC for FMO07550

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:50
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG30033-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07550.5prime Sequence

206 bp (206 high quality bases) assembled on 2008-10-22

> FMO07550.5prime
CAGTCGACATGCAGGTGCTAGGCGGCAATCCACTCAGCTTGTGTCTCTTG
GTGATCATCACTCCGTCACTGATTGCAGCCAATCCCCTGTGGAGTCTTGA
CCAGGTGGGAGCATACTTCACTGGCATCTTCCGCTCCGTAGTGGGTCCAA
TATTTGGCTTTGGCCTGGCAGCCAACAGCACCGCCTTAGCAAGCTTTCTA
GACCAT

FMO07550.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG30033-RC 572 CG30033-RC 18..197 9..188 900 100 Plus
CG30033-RB 1002 CG30033-RB 18..197 9..188 900 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11292548..11292650 9..111 515 100 Plus
2R 25286936 2R 11292708..11292786 110..188 395 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:36:57 has no hits.

FMO07550.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:06:29 Download gff for FMO07550.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30033-RB 21..208 9..196 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:51 Download gff for FMO07550.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30033-RB 18..205 9..196 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:04 Download gff for FMO07550.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30033-RB 18..205 9..196 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:04 Download gff for FMO07550.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 11292548..11292650 9..111 100 -> Plus
2R 11292710..11292794 112..196 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:51 Download gff for FMO07550.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7180053..7180155 9..111 100 -> Plus
arm_2R 7180215..7180299 112..196 96   Plus