FMO07554.5prime Sequence
885 bp (885 high quality bases) assembled on 2008-10-22
> FMO07554.5prime
CAGTCGACATGGACTGGTACGTGGGCACAGAGTGGGAGGACAAGAACCGT
GGTCTGGCCAAGAAGGTAATTGGCCTCCAATTCACCGAAATGGACAAGCC
CACGATAATCAGTACGGTGGAATTCAGTGTCAACAAGAAAGCCACCAACT
TGGGAGGACGACCTAGCAAATATTTGGTCAGCGATGAGTCCGCTACGTAT
CCTCAAAAGCACAGCCTGGAAATGGGCACCAGCCTGACCGCAGTGGACTG
CTACTTGGAGCTGCTGCTGCAGCAATTTGTGCCGGGTGAAACGGCAGCCT
GTAGCATCACGACAAAAACCGGCGAACGAATAGAATTTGAACTGAAGCTG
GAGAAAATTGTGAAGAACACTCAGGTGGAGAAGCTAAGCGCTGCAGAGAT
CTATGAGGTGGCACTACGTCTCAAGGAAAGCGGCGTGGCCACCTTTAAGA
CGTTCCCGAAATTCGCCTTTGATTACTTTGTGCGTGCCGCAAAGTTGCTG
ATCACCTACAAACCCTTCGATAAACTGACCAAAAAGACCAATGGCATCAA
CGGCCAGGCGGTGGAGGAGCTCTTTATTCAGATACAGACCAACCTGGCCG
CCTGTTTGCTGCACGAGAAACGCTATGAGCATGTAATCTACCACACGCAG
TTTGTGGAGACGGAGGAGAGTCCCAGCGAGAAGAGCATCTACCGGCGTGC
ACTCGCCTACTATCACCTGAAGGAGTTCGCCAAGGCGCAAGCCACCATCG
AGCGAATGCCCAACTACGAGGAGAAGCGAGAGTTCAGCAAGCTGCGCGAC
AACATCGCTGTTAGCTGGAAGGATAGCAAGGCCCATTACAAGGAGGTGGT
GCAACGTATGTTTAGTGCAAGCTTTCCTAGACCAT
FMO07554.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bdbt-RA | 1000 | CG17282-RA | 73..930 | 9..866 | 4260 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21117927..21118784 | 866..9 | 4260 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:19:10 has no hits.
FMO07554.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:06:35 Download gff for
FMO07554.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17282-RA | 66..926 | 9..867 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:24 Download gff for
FMO07554.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17282-RA | 73..935 | 9..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:24 Download gff for
FMO07554.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bdbt-RA | 73..935 | 9..874 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:24 Download gff for
FMO07554.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21117922..21118784 | 9..874 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:24 Download gff for
FMO07554.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16943644..16944506 | 9..874 | 99 | | Minus |
