FMO07555.5prime Sequence
488 bp (488 high quality bases) assembled on 2008-10-22
> FMO07555.5prime
CAGTCGACATGACTGCGCCGCGACGCCTGCGAAAAGAATTGAGCGATTTG
CAGGGCAACGCACTGAAGTCCTTCCGGGACATTAAGGCGGACGATGACAA
CCTGCTGCGCTGGACGGGATTGATTGTCCCGGACAATCCGCCGTACAACA
AGGGCGCCTTCCGCATCGAGATCAACTTTCCGGCGGAGTATCCTTTCAAG
CCGCCCAAGATTAACTTTAAGACACGCATCTACCATCCAAACATCGATGA
GAAGGGCCAGGTGTGCTTGCCCATTATCAGTACGGAGAACTGGAAACCGG
CCACACGCACCGACCAGGTCGTGCAGGCACTGGTGGACTTAATCAACGAC
CCTGAGCCGGAGCATCCGCTGCGGGCGGAGTTGGCCGAGGAGTTTCTTAA
GGATCGCAAAAAATTCGTGAAAAACGCCGAGGACTACACCAAGAAGCACA
GCGAAAAACGTCCGGCCGACGCAAGCTTTCTAGACCAT
FMO07555.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ubc10-RA | 999 | CG5788-RA | 309..770 | 9..470 | 2310 | 100 | Plus |
Ubc84D-RA | 637 | CG12799-RA | 191..536 | 101..446 | 440 | 75.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17788641..17789102 | 470..9 | 2310 | 100 | Minus |
3R | 32079331 | 3R | 7518921..7519266 | 446..101 | 440 | 75.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:31:53 has no hits.
FMO07555.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:06:36 Download gff for
FMO07555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
UbcD10-RA | 301..773 | 1..476 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:23 Download gff for
FMO07555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
UbcD10-RA | 302..774 | 1..476 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:02 Download gff for
FMO07555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ubc10-RA | 302..774 | 1..476 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:02 Download gff for
FMO07555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17788637..17789109 | 1..476 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:23 Download gff for
FMO07555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13676142..13676614 | 1..476 | 98 | | Minus |