FMO07560.5prime Sequence
290 bp (290 high quality bases) assembled on 2008-10-22
> FMO07560.5prime
CAGTCGACATGAAATCGGTCACGTTCGTACTCTGCCTGCTCGTTCTGGGC
GCCCACTCGCTGCTGGTGTTCGCCGTGGATTGCGAGATCGGTGGGCATCA
GTTCAAGACCGGAGAGAAGTACACGCCGGAAGGTCGCTGCCTGCAGTACA
CCTGCCAGGCACCCAAACAGGTGACTGCCTTGGGATGCCCGGCCATCGCC
TCCTTGAAGCCCTGCAAAATGGAAGAGGATCTGAGCAAACCCTATCCCGG
CTGCTGTCCCAAGTTCAACTGCGCAAGCTTTCTAGACCAT
FMO07560.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ssp7-RA | 368 | CG32667-RA | 20..283 | 9..272 | 1320 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11140001..11140110 | 184..75 | 550 | 100 | Minus |
X | 23542271 | X | 11139847..11139935 | 272..184 | 445 | 100 | Minus |
X | 23542271 | X | 11140178..11140244 | 75..9 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:34:55 has no hits.
FMO07560.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:06:25 Download gff for
FMO07560.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32667-RA | 14..289 | 1..276 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:39 Download gff for
FMO07560.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32667-RA | 14..289 | 1..276 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:15 Download gff for
FMO07560.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ssp7-RA | 14..289 | 1..276 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:15 Download gff for
FMO07560.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11139841..11139934 | 185..276 | 97 | <- | Minus |
X | 11140001..11140109 | 76..184 | 100 | <- | Minus |
X | 11140178..11140250 | 1..75 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:39 Download gff for
FMO07560.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11033874..11033967 | 185..276 | 97 | <- | Minus |
arm_X | 11034034..11034142 | 76..184 | 100 | <- | Minus |
arm_X | 11034211..11034283 | 1..75 | 94 | | Minus |