FMO07564.5prime Sequence
299 bp (299 high quality bases) assembled on 2008-10-22
> FMO07564.5prime
CAGTCGACATGACTGCCGTTCCACCCCCCTCCAACATCTCTACCCTAATG
CCATTGGAATTGGTGGACAAATGCATCGGTTCCCGCATCCACATTATCAT
GAAGAACGACAAGGAGATGGTGGGAACTCTCTTAGGATTCGATGACTTTG
TGAATATGCTCTTGGACGACGTAACGGAGTATGAAAATACCCCCGACGGC
CGCCGCATCACCAAACTGGATCAGATTCTGCTCAACGGGAACAATATCAC
AATGTTGGTGCCTGGCGGAGAGCTGGCGGAGGCAAGCTTTCTAGACCAT
FMO07564.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:40:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6610-RC | 520 | CG6610-RC | 103..377 | 7..281 | 1375 | 100 | Plus |
CG6610-RB | 421 | CG6610-RB | 103..377 | 7..281 | 1375 | 100 | Plus |
CG6610-RA | 586 | CG6610-RA | 103..377 | 7..281 | 1375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:39:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6075760..6075961 | 57..258 | 995 | 99.5 | Plus |
3L | 28110227 | 3L | 6075638..6075688 | 7..57 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:40:00 has no hits.
FMO07564.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:06:46 Download gff for
FMO07564.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6610-RA | 97..386 | 1..289 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:35:15 Download gff for
FMO07564.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6610-RA | 98..387 | 1..289 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:13 Download gff for
FMO07564.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6610-RA | 98..387 | 1..289 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:13 Download gff for
FMO07564.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6075633..6075688 | 1..57 | 94 | -> | Plus |
3L | 6075761..6075957 | 58..254 | 100 | -> | Plus |
3L | 6076023..6076059 | 255..289 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:35:15 Download gff for
FMO07564.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6068733..6068788 | 1..57 | 94 | -> | Plus |
arm_3L | 6068861..6069057 | 58..254 | 100 | -> | Plus |
arm_3L | 6069123..6069159 | 255..289 | 91 | | Plus |