Clone FMO07564 Report

Search the DGRC for FMO07564

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:64
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG6610-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07564.5prime Sequence

299 bp (299 high quality bases) assembled on 2008-10-22

> FMO07564.5prime
CAGTCGACATGACTGCCGTTCCACCCCCCTCCAACATCTCTACCCTAATG
CCATTGGAATTGGTGGACAAATGCATCGGTTCCCGCATCCACATTATCAT
GAAGAACGACAAGGAGATGGTGGGAACTCTCTTAGGATTCGATGACTTTG
TGAATATGCTCTTGGACGACGTAACGGAGTATGAAAATACCCCCGACGGC
CGCCGCATCACCAAACTGGATCAGATTCTGCTCAACGGGAACAATATCAC
AATGTTGGTGCCTGGCGGAGAGCTGGCGGAGGCAAGCTTTCTAGACCAT

FMO07564.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:40:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG6610-RC 520 CG6610-RC 103..377 7..281 1375 100 Plus
CG6610-RB 421 CG6610-RB 103..377 7..281 1375 100 Plus
CG6610-RA 586 CG6610-RA 103..377 7..281 1375 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:39:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6075760..6075961 57..258 995 99.5 Plus
3L 28110227 3L 6075638..6075688 7..57 255 100 Plus
Blast to na_te.dros performed on 2014-11-28 21:40:00 has no hits.

FMO07564.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:06:46 Download gff for FMO07564.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6610-RA 97..386 1..289 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:35:15 Download gff for FMO07564.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6610-RA 98..387 1..289 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:13 Download gff for FMO07564.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6610-RA 98..387 1..289 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:13 Download gff for FMO07564.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6075633..6075688 1..57 94 -> Plus
3L 6075761..6075957 58..254 100 -> Plus
3L 6076023..6076059 255..289 91   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:35:15 Download gff for FMO07564.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6068733..6068788 1..57 94 -> Plus
arm_3L 6068861..6069057 58..254 100 -> Plus
arm_3L 6069123..6069159 255..289 91   Plus