FMO07573.5prime Sequence
1002 bp (937 high quality bases) assembled on 2008-10-22
> FMO07573.5prime
CAGTCGACATGCCACAGTCAGAGGGCGGCTATGTATCGCTGCCGGCCGTC
AATGGCAATGGCGGCGCCATCTATCAGTCGACCACAGAGCCCACGGCCCC
GCCCTCCGTTTTTGCGAGCGTGAAGCGGGCCATTGGCCAGGCCATCAAGT
CCTCGCCCACCGACAGCGAGGAGCTGCTCCGGTCGGACCGCCTGCCGGTC
ATCGTCGGCGGCTCCAGAGACCGCGACAAATCCGGTAAGACACTGACCAC
CAAGATGCCGTCAGCTCCAACACACACTGCCGAGGAGGCACATCTGCTGG
GCACCATGCCCGTTGATCCCATGGATGACATCGAACTGCGCTCCGTGCAG
CTGCAATTCCCCAATGCCCGCGGCTCCATCCTGGAGGCCTGCGAACAGCG
ACGCGTGCCCACAGACAAGGGCGATGTCCACGTGGCCATACAGGGCGATA
CGGCCAAGCCGGCCATTATCACCTACCACGATTTGGGCCTCAACTACGCC
ACCAGCTTTGCTGGCTTCTTCAATTTTCCAGTGATGCGAGGTCTGCTGGA
GAACTTCTGTGTTTACCATGTGACTGCTCCTGGCCAGGAGGAGGGTGCAC
CCACTTTGCCAGAGGATTACGTCTATCCGACCATGGATGATCTGGCCGCC
CAGCTGCTTTTCGTGCTATCCCACTTTTGGCCTAAAGTCGGTGATTGGTT
TCGGCGTTGGTGCCGGGGCGAATATTCTGGGCACGTTTCGCTCACGCCCA
TCCGGACAAGGTGGGCGCCCTGTGCCTGATCAATTGCGTGTCCACGCAGT
CGGGGCTGGATCGAGTGGGGCTACCAGAGCTTCAATGCCCCGCTTCTTGC
GCACCCAGGGGCTTGACACAGGGCGTGATCGATTATCTGATGTGGCACCA
CTTGTGACGCATTCCGGAAGGACCCCAATCACGACCTGGTGCAGATGTAT
AATCAGCACTTCCAGCGTGGCGTAATCCGACCAATCCTTGCATGGCTAAT
CA
FMO07573.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MESK2-RC | 2193 | CG15669-RC | 602..1575 | 8..986 | 4545 | 98.1 | Plus |
| MESK2-RE | 2619 | CG15669-RE | 575..1548 | 8..986 | 4545 | 98.1 | Plus |
| MESK2-RF | 2425 | CG15669-RF | 381..1354 | 8..986 | 4545 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21511404..21511768 | 617..986 | 1340 | 95.1 | Plus |
| 2R | 25286936 | 2R | 21507513..21507722 | 8..217 | 1050 | 100 | Plus |
| 2R | 25286936 | 2R | 21510866..21511060 | 301..495 | 975 | 100 | Plus |
| 2R | 25286936 | 2R | 21511123..21511243 | 496..616 | 590 | 99.2 | Plus |
| 2R | 25286936 | 2R | 21510115..21510201 | 215..301 | 435 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:21:26 has no hits.
FMO07573.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:06:56 Download gff for
FMO07573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESK2-RF | 381..1368 | 8..1001 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:03 Download gff for
FMO07573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESK2-RF | 381..1368 | 8..1001 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:07 Download gff for
FMO07573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESK2-RF | 381..1368 | 8..1001 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:07 Download gff for
FMO07573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21510867..21511060 | 302..495 | 100 | -> | Plus |
| 2R | 21511123..21511243 | 496..616 | 99 | -> | Plus |
| 2R | 21507513..21507722 | 8..217 | 100 | -> | Plus |
| 2R | 21510118..21510201 | 218..301 | 100 | -> | Plus |
| 2R | 21511404..21511782 | 617..1001 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:03 Download gff for
FMO07573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17398372..17398565 | 302..495 | 100 | -> | Plus |
| arm_2R | 17398628..17398748 | 496..616 | 99 | -> | Plus |
| arm_2R | 17395018..17395227 | 8..217 | 100 | -> | Plus |
| arm_2R | 17397623..17397706 | 218..301 | 100 | -> | Plus |
| arm_2R | 17398909..17399287 | 617..1001 | 94 | | Plus |
