Clone FMO07577 Report

Search the DGRC for FMO07577

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:77
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31226-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07577.5prime Sequence

182 bp (182 high quality bases) assembled on 2008-10-22

> FMO07577.5prime
CAATCGACATGTGCAGCTATCCTTGCTATCCTTGCGCCGCCTTGTGTCCC
TGCGGAGGCAGTGGACCAAGTGGATTCTACGATCCGTGCTTTGGACCCTA
CAACGGACCATTTAACTCCTGGTGCGGAGCAAGTGGACCCGGTTTCTGGA
GAGGGGGATGTTGCGCAAGCTTTCTAGACCAT

FMO07577.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31226-RB 384 CG31226-RB 91..247 8..164 770 99.4 Plus
CG31226-RA 389 CG31226-RA 96..252 8..164 770 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18851495..18851651 164..8 770 99.4 Minus
Blast to na_te.dros performed on 2014-11-28 19:13:50 has no hits.

FMO07577.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:07:02 Download gff for FMO07577.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31226-RA 94..264 1..173 95   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:20 Download gff for FMO07577.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31226-RA 88..258 1..173 95   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:00 Download gff for FMO07577.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31226-RA 88..258 1..173 95   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:00 Download gff for FMO07577.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 18851488..18851659 1..173 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:20 Download gff for FMO07577.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14677210..14677381 1..173 95   Minus