FMO07578.5prime Sequence
314 bp (314 high quality bases) assembled on 2008-10-22
> FMO07578.5prime
CAGTCGACATGAGTATTTCTTTAATACGCAAACATCTGAACGAGATGGGG
ACCCTTAAGCTCCGATCGTCCATGGGTCGGAACTATATTCCCATGGCCGG
TCCTCCTCGATTTCCGATGAGTTCAGCGCAGCGTTTGATCTTTGGTTGCG
GTTCCTTGGTTGTCATGATGATCATTCCCTTCTACTGCCTCTTCAGCCTG
CCCCGATGGTCGAGGATGCATTTGGGACTTCCGCCGGAGGAGGACGAGCA
GGCGGAGGAGCCTCCACCACAAGAGGAAAAGGACAAGGAGAAGAAAGCAA
GCTTTCTAGACCAT
FMO07578.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:40:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12617-RC | 1022 | CG12617-RC | 102..391 | 7..296 | 1450 | 100 | Plus |
| CG12617-RB | 569 | CG12617-RB | 102..391 | 7..296 | 1450 | 100 | Plus |
| CG12617-RA | 538 | CG12617-RA | 102..391 | 7..296 | 1450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:40:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20294884..20295173 | 7..296 | 1450 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:40:03 has no hits.
FMO07578.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:07:04 Download gff for
FMO07578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12617-RA | 83..377 | 1..296 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:35:18 Download gff for
FMO07578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12617-RA | 89..383 | 1..296 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:15 Download gff for
FMO07578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12617-RA | 97..391 | 1..296 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:15 Download gff for
FMO07578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20294879..20295173 | 1..296 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:35:18 Download gff for
FMO07578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20294879..20295173 | 1..296 | 98 | | Plus |
