Clone FMO07579 Report

Search the DGRC for FMO07579

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:79
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG30487-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07579.5prime Sequence

621 bp (621 high quality bases) assembled on 2008-10-22

> FMO07579.5prime
CAGTCGGACATGTCTATAGAAAAAATCTCCTCCGAGCTGCGTAAGATGAT
AATATCTGACAATCCAATCGAAGCAACAACTTTCGATAAATCTGCAATAG
AGGCAACTTTGGATTCCAACAAATTCGAAGATCTACGAATTCCGAAGCAT
ACACTGAAGCAAAAGTTTCTTCTTCGAAAGTCAATAATTGAACATCCCTT
TAAAAGAATTCGTGCCGAAGGAGTGGATTGGGCTCACAAAATTCGAGACA
CCGACGAAGAGAAGGAATCTAATTGGGCAAAGATTGCGACTGGAAAGGTT
TCTGGCAATGCCTACGATCTTAAAACCATGATGAGCGAGTGTGAAAATAT
TTGTGGTTACGGAAACGCCATAAACTTGACGGTCCCAAGGGTGGACAAAC
TACAGGATCTGGCTAAATCGATCCCAACGGATCCCGATACAGTCTACCTG
ACCTGTCAATGTGATGATATTTTCTCTAATGGAGGCACAGAAGCTCCGAC
TCAAAGCCCCGACGAAGTTAATTTCGAAGAGCTGTCCAGCTACTTCGAAA
ATATGCTCAACATACCCAAGAATCTTCCGCTCAGCGCTGAAATAATGTAT
ACTGCAAGCTTTCTAGACCAT

FMO07579.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG30487-RA 728 CG30487-RA 73..667 9..603 2975 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12937677..12938271 603..9 2975 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:30:38 has no hits.

FMO07579.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:07:05 Download gff for FMO07579.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30487-RA 73..675 9..611 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:47 Download gff for FMO07579.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30487-RA 73..675 9..611 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:38 Download gff for FMO07579.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30487-RA 73..675 9..611 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:38 Download gff for FMO07579.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12937669..12938271 9..611 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:47 Download gff for FMO07579.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8825174..8825776 9..611 99   Minus