Clone FMO07580 Report

Search the DGRC for FMO07580

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:75
Well:80
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32148-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07580.5prime Sequence

275 bp (275 high quality bases) assembled on 2008-10-22

> FMO07580.5prime
CAGTCGACATGAGTGGAATTCTGTTAAAATTTCTGCCCAAAAACGAGTTG
CTTCATCAATCACTATACTTTTGCAGAGGAATGGCCAAAAAGAAGAGCCA
AAGTCAAGGCACCGAAAAGGGCAAGAAAACCTGTAATAAGAATCAGTTCT
TTGGCGGCTGCTTTAAGAAGTCCGAACCATTTAGGAGGGAGAACAAGAAG
GAGAAGAGCAAACGATGTCGGGATCCTTGCAAAGATGGACCCTGTCGCCC
CGAGAAAGCAAGCTTTCTAGACCAT

FMO07580.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG32148-RA 456 CG32148-RA 75..323 9..257 1230 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15023566..15023725 9..168 800 100 Plus
3L 28110227 3L 15023788..15023876 169..257 430 98.9 Plus
Blast to na_te.dros performed on 2014-11-28 23:32:03 has no hits.

FMO07580.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:07:07 Download gff for FMO07580.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32148-RA 68..323 1..257 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:28 Download gff for FMO07580.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32148-RA 68..323 1..257 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:09 Download gff for FMO07580.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32148-RA 68..323 1..257 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:09 Download gff for FMO07580.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15023559..15023725 1..168 97 -> Plus
3L 15023788..15023876 169..257 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:28 Download gff for FMO07580.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15016659..15016825 1..168 97 -> Plus
arm_3L 15016888..15016976 169..257 98   Plus