FMO07581.5prime Sequence
357 bp (357 high quality bases) assembled on 2008-10-22
> FMO07581.5prime
CAGTCGACATGGGCGTCCAGGCAAATTTAGATGATTTGAGTGAGGAGGAG
AAAATCTTCTATATGTTTAAGGCCCATGACAATGATAATAACAATGCACT
GGACGGCCTCGAAATGATTCAGTCTGCCATGCATCATAACTATGACTATT
TCAAAAACAACGAGCGGGATGCATACCTACAAAATGCCACCGATGAGCTG
GAGCACTTTATAGAGGCAATTGATAAATTTCTGCTGATTGCCGACGACAA
TAACGATGGCCTGCTGCATTACCCGGAATTCGTGAAGGCAATTACCGGTG
GCAAGGAGCAGCCGAATGTGGACAGGAATATCCTGCGCCGCAAGCTTTCT
AGACCAT
FMO07581.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12817-RB | 1060 | CG12817-RB | 250..582 | 6..338 | 1665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10224151..10224294 | 213..70 | 720 | 100 | Minus |
| 3R | 32079331 | 3R | 10223918..10224048 | 338..208 | 640 | 99.2 | Minus |
| 3R | 32079331 | 3R | 10224350..10224416 | 72..6 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:00:28 has no hits.
FMO07581.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:07:08 Download gff for
FMO07581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12817-RA | 298..636 | 1..343 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:30 Download gff for
FMO07581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12817-RB | 247..585 | 1..343 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:57 Download gff for
FMO07581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12817-RB | 247..585 | 1..343 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:57 Download gff for
FMO07581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10223915..10224042 | 214..343 | 97 | <- | Minus |
| 3R | 10224151..10224292 | 72..213 | 100 | <- | Minus |
| 3R | 10224351..10224418 | 1..71 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:30 Download gff for
FMO07581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6049637..6049764 | 214..343 | 97 | <- | Minus |
| arm_3R | 6049873..6050014 | 72..213 | 100 | <- | Minus |
| arm_3R | 6050073..6050140 | 1..71 | 95 | | Minus |
