FMO07582.5prime Sequence
864 bp (864 high quality bases) assembled on 2008-10-22
> FMO07582.5prime
CAGTCGACATGGCCAAGTTGGACGAAAAGATCGGCTTCATCGGGGGCGGA
AACATGGCCTACGCCATAGGATCCGGACTGGTGCGCTGTGGGATCGTGAA
GGCTAGCCAGGTGCAGGTCTCCGGTCCCCACATTGAGAACCTGCAACGGT
GGCGGGATCTGGGAGCTGTGACCTGCGACGACAACTGCATGGTCCTGGAG
CACTCGGACATAGTTTTCATCTGCGTAAAGCCACACATGCTAACGCCGTG
TGCCGCCCAGCTTAAATACAAGCACGTGCCGTCGGCCAAGGATGCCAGCA
AGCTGGTGGTGTCGGTTCTGGCGGGTACCAGTCTCGAAACGCTGGAGGAG
GCCTTCAGCTTCATGGGCAGTTCGGAGCTGAAGGTGATACGCACCATGCC
CAATACATCCATGCAGGTGGGCGAGGGCTGCACTGTTTACACTGGCAACG
CACGCGTTTCGCATCACGACTTGGAAAAGATTCACCTAATGCTCAACGCC
CTGGGACTGGCGCAACAGGTGCCCGAGTCCATGATCGACGCCGTTACCGG
GGTAGCTGGATGCGGTCCGGCATTTGTTTACACCATCATAGAGGCACTGG
CCGATGGCGGCGTCAAACAGGGCGTTCCGCGTCAGATGGCTCTTCAGTTT
GCGGCTCAGACGCTTCTGGGAGCGGCCAAAACGGTGCTGCTCACTGGAAA
ACATCCGGCGGTGCTGCGGGATGAAGTCTGTTCTCCCGGTGGCGCCACCA
TAGTATGCGTTCATGAACTGGAAAGGGGAACCTCAGGTCTACTTTAATAA
ACGCCGTGGAAAGTCGTCACAGCGCTCTGCTGACTGGGGAAGAAGGCAAG
CTTTCTAGACCATT
FMO07582.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| P5cr-RA | 1168 | CG6009-RA | 238..1078 | 8..845 | 4100 | 99.4 | Plus |
| Prp18-RA | 1304 | CG6011-RA | 1203..1267 | 845..783 | 260 | 95.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19029168..19029949 | 8..788 | 3845 | 99.7 | Plus |
| 3R | 32079331 | 3R | 19030005..19030056 | 783..833 | 210 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:17:01 has no hits.
FMO07582.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:06:53 Download gff for
FMO07582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| P5cr-RA | 232..1076 | 8..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:33 Download gff for
FMO07582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| P5cr-RA | 232..1076 | 8..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:16 Download gff for
FMO07582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| P5cr-RA | 238..1082 | 8..849 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:16 Download gff for
FMO07582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19029168..19029947 | 8..786 | 99 | -> | Plus |
| 3R | 19030009..19030073 | 787..849 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:33 Download gff for
FMO07582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14854890..14855669 | 8..786 | 99 | -> | Plus |
| arm_3R | 14855731..14855795 | 787..849 | 92 | | Plus |
