FMO07592.5prime Sequence
698 bp (698 high quality bases) assembled on 2008-10-22
> FMO07592.5prime
CAGTCGACATGCCGAACTTGGATCTCTACAATTTCCCCATGGCGCCGGCC
AGTCGCGCCATCCAGATGGTGGCCAAGGCTTTGGGTCTGGAGCTGAACTC
CAAGTTGATCAACACGATGGAGGGTGACCAACTGAAGCCAGAGTTCGTGA
GGATTAACCCACAGCACACCATTCCCACGCTGGTGGACAATGGATTTGTC
ATCTGGGAGTCGCGTGCCATCGCCGTCTATCTGGTGGAGAAGTACGGCAA
ACCCGATTCCCCACTCTATCCCAACGATCCCCAGAAGCGGGCTTTGATCA
ACCAGAGGCTTTACTTCGATATGGGCACCCTGTACGACGCCCTGACCAAA
TACTTCTTCCTAATCTTCCGCACTGGCAAATTCGGAGATCAGGAAGCTCT
GGACAAGGTTAACTCCGCCTTTGGATTCCTCAACACCTTCCTGGAGGGTC
AGGACTTCGTGGCCGGTAGCCAACTGACCGTGGCTGATATCGTCATCCTG
GCCACCGTATCCACCGTAGAATGGTTTTCGTTTGACCTAAGCAAGTTCCC
CAACGTGGAGAGGTGGCTTAAGAATGCCCCAAAAGTAACTCCTGGATGGG
AGCAAAATCTTGAGAGTCTGCAGCAGGGAAAGAAGTTCCTGCAGGACCTT
CAAGCGGCAAAGGAAAAGGAAGTAAAGGCCGCAAGCTTTCTAGACCAT
FMO07592.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstD7-RA | 756 | CG4371-RA | 47..718 | 9..680 | 3360 | 100 | Plus |
| GstD2-RA | 734 | CG4181-RA | 76..521 | 66..514 | 705 | 78.2 | Plus |
| GstD4-RA | 725 | CG11512-RA | 171..579 | 135..546 | 565 | 77.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12378546..12379217 | 9..680 | 3360 | 100 | Plus |
| 3R | 32079331 | 3R | 12372046..12372491 | 66..514 | 665 | 77.1 | Plus |
| 3R | 32079331 | 3R | 12375812..12376309 | 66..566 | 535 | 74.3 | Plus |
| 3R | 32079331 | 3R | 12374270..12374678 | 135..546 | 525 | 75.7 | Plus |
| 3R | 32079331 | 3R | 12377276..12377752 | 122..601 | 505 | 74.2 | Plus |
| 3R | 32079331 | 3R | 12380135..12380348 | 117..333 | 375 | 79.3 | Plus |
| 3R | 32079331 | 3R | 12368254..12368514 | 335..72 | 370 | 76.9 | Minus |
| 3R | 32079331 | 3R | 12373129..12373385 | 65..324 | 290 | 75 | Plus |
| 3R | 32079331 | 3R | 12365229..12365398 | 334..162 | 200 | 75.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:21:55 has no hits.
FMO07592.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:07:19 Download gff for
FMO07592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstD7-RA | 1..675 | 9..684 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:11 Download gff for
FMO07592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstD7-RA | 1..691 | 2..692 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:19 Download gff for
FMO07592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstD7-RA | 39..730 | 1..692 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:19 Download gff for
FMO07592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12378538..12379229 | 1..692 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:11 Download gff for
FMO07592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8204260..8204951 | 1..692 | 98 | | Plus |
