Clone FMO07602 Report

Search the DGRC for FMO07602

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:76
Well:2
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14384-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07602.5prime Sequence

521 bp (521 high quality bases) assembled on 2008-11-03

> FMO07602.5prime
CAGTCGACATGTCCCTCAATTGCCCGGTTCATAATAAGAACTCCAGTGGC
TTAAACATTACCAGGTCCGCAACCTCGGATGACGTCAAGATCGCCATGTG
CGCCTGCTTGGAATTGGCCAACTGTCGGGCCGAAAACTGTCAGCTGAAGA
AGAAACTGACCGAATATGAGGCCAAGATCTGCAGTCTCGAACAACTGGTG
GCCACCATTGCGGAGGAGCAGAACCAGATTCGCCAAGAAGTGATCGAGTT
GCGCAATGAGACTCAGGGTGCAACGATGGAAGCCGCCAACGAGGTGGATC
CTTTGGACAACTCATTCGTGAACCCGCAAGAGGAAATGGACGATGAGGAA
GGATACGATCCGGATTCAGAATCCGAGTACAATGCTATCCAGTCCCCCAA
TCCCTCAATACATTCTTCGATGGTCTCGCTGGTTCGCTCATTGAGTTTTT
CATCCACCAGCTCAGATTCTGATTGCATTGTATACAGCGATAATGAGGAT
TTCGCAAGCTTTCTAGACCAT

FMO07602.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14384-RB 1213 CG14384-RB 625..1119 9..503 2475 100 Plus
CG14384-RA 707 CG14384-RA 119..613 9..503 2475 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12966032..12966480 503..55 2230 99.8 Minus
3R 32079331 3R 12966553..12966602 58..9 250 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:35:56 has no hits.

FMO07602.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:09:34 Download gff for FMO07602.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14384-RA 113..617 1..508 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:14 Download gff for FMO07602.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14384-RA 113..617 1..508 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:47 Download gff for FMO07602.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14384-RA 113..617 1..508 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:47 Download gff for FMO07602.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 12966028..12966476 59..508 99 <- Minus
3R 12966553..12966608 1..58 93   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:14 Download gff for FMO07602.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8791750..8792198 59..508 99 <- Minus
arm_3R 8792275..8792330 1..58 93   Minus