FMO07605.5prime Sequence
1253 bp (1056 high quality bases) assembled on 2008-11-03
> FMO07605.5prime
CAGTCGACATGGATTTCCTAAAGCCCTTCCAGGGACCGGGCAGGAACTCC
GCGAATGGCAATGGAAAATCCAACGACGAGGACGACACAGAGTGTGATTT
TGGTTACCAAGTTTTGGCCAAGGCGGCCAGCAATGGAGGCGAGGATGAGC
TGAAGATAACCATTGCCACTGCATCGGCTGGTTGCTCATCCATGGGGACG
CACACGGTTAATACCTATACTACCGCTTTAAGCAGTACTTCGGCGTCCGG
CATAACATCAAGTTTGGGCGCGACCACGCCCCCGAATATGATCTCTCCAG
GCAGCAATTTGGGCGGAACAGGAGGAGGTTCTGGGTCCGTGGGACCGCAA
ATCCACAACAGCAATAGCAACGGCAGTGCAACCGGAAGTCTAAACTGTGC
TGCAGTGGCACCGCTCAGTTCGATGACTCCACCTGCCACCAGTGGCAGTA
ATTCCGCCGTAGTCTTGCCCCTGCCCATCTCACCCGCATCCTCAGTCGCT
GCCGCAGCTGCTGCTGTCAGCAAGGCCAATGCAAATGCCCTGGCCTCTCT
GGCTAACCATCTGCCCATGGGCTTGGGCGTGAGCGGACTGGCCCAGCAGA
TGTTCCCGCTAGCCACGCTCAAGGCGGCGGCAGTGGCTGCTGGTCTTCCC
CTGCCACCTACGATCACGCCGCCTGGTTGCAGCACCGGCAGCGCAACCAA
CAGCAATGTCGGTTGTCTGATCATCGAGCCGCATCTCTTTGCGGCGGCGG
ACAACTTTCAAGAAAGAACTGACAGCGGCTGCGGCAGCTGGAGCACCTTT
GGGATTGTTCCAGAACCTGGCCCACCAAGTGCAGAACGCCAATCGTTTGA
CCGGCAGCTGCCCGAGCTTACCCATGGGTAATCCCACTCCTCCGCCGCCG
CCGCCAGCGCCACCAGCCTCCAAGGTGCGAAGGGTAACACCTTCGCCGCA
AACCACGGCCATCAACCTAAGTTGCTCCGGAGGAAATCCGTACAAACGCA
GCAGCAGCAGTCATGCAAATGCCACAAATTCACAGCACACAGCGTCGCCC
GCCAAACGCGTTAGATTTGCATCCGCGCTTTCGAACGATTGGTACGTCTC
TGCGGGCTACAGGCCACAAAGAACTGACGCAAACCTCTCTTTTCTTCTGA
GATCTGGGCGCAGGTGTCGGCATGGCTAGATTCCAGTCCTTCGCCAAAGT
CGCTTGCTGGCTAAATCGTTCTGGTATTGTGAGCTCATGAGATGCTGAGC
AAC
FMO07605.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13204-RB | 1797 | CG13204-RB | 230..1401 | 7..1166 | 5215 | 97.3 | Plus |
| CG13204-RA | 2074 | CG13204-RA | 507..1678 | 7..1166 | 5215 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11368755..11369838 | 42..1116 | 4715 | 97.8 | Plus |
| 2R | 25286936 | 2R | 11368662..11368699 | 7..44 | 190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:39:22 has no hits.
FMO07605.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:15:24 Download gff for
FMO07605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13204-RB | 231..1410 | 1..1169 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:59 Download gff for
FMO07605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13204-RA | 501..1680 | 1..1169 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:13:47 Download gff for
FMO07605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13204-RA | 501..1680 | 1..1169 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:13:47 Download gff for
FMO07605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11368656..11368698 | 1..43 | 95 | -> | Plus |
| 2R | 11368757..11369893 | 44..1169 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:59 Download gff for
FMO07605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7256161..7256203 | 1..43 | 95 | -> | Plus |
| arm_2R | 7256262..7257398 | 44..1169 | 97 | | Plus |
