Clone FMO07606 Report

Search the DGRC for FMO07606

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:76
Well:6
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG30121-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07606.5prime Sequence

257 bp (257 high quality bases) assembled on 2008-11-03

> FMO07606.5prime
CAGTCGACATGACAGCAGCGAAACTGAGGTCAACACTTGGCTTTGCGTGC
GCAAAAGGCAGGCCAAAGTCAAACGGAAATCTGCATAAGACCCTCCAGTT
GCGATTGACAGTCCTTGAGATGTTTCCACTCAGTTTCCCATGTCTGTGGC
CTCTGACAGAACCTGAACAGCAAACCGAGCACCAAAACATCGAACAGCTG
GGTGGGCAATTAAAAGGCATTCCAGAGGTCAGCATAAATGCAAGCTTTCT
AGACCAT

FMO07606.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:00:21 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18740395..18740625 239..9 1155 100 Minus
Blast to na_te.dros performed on 2014-11-28 19:00:20 has no hits.

FMO07606.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:15:22 Download gff for FMO07606.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30121-RA 805..1035 9..239 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:37 Download gff for FMO07606.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 18740395..18740625 9..239 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:37 Download gff for FMO07606.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 18740395..18740625 9..239 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:47 Download gff for FMO07606.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14627900..14628130 9..239 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:47 Download gff for FMO07606.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14627900..14628130 9..239 100   Minus