FMO07628.5prime Sequence
1216 bp (1050 high quality bases) assembled on 2008-11-03
> FMO07628.5prime
CAGTCGACATGAACCTCACAGAGCAAAACCCATATGGAAACGGGCTGCTC
TACGCAGCCTTCAATCAAGACCAAGGATGCTTCGCGTGCGCGACGGACAC
CGGATTCCGGGTCTACAACTGTGATCCGCTGAAGGAGAAGGAGCGCCAAT
ACTTTCCAGAGGGTGGTCTCAGCCATGTGGAGATGCTGTTTCGTTGCAAT
TACTTAGCCCTGGTTGGAGGCGGCATCCGGCCGCTGTACCCGCCCAACAA
GGTGATCGTGTGGGATGACCTGAAGAAGTCCCCGGCCATATCGCTGGACT
TCAATCAGCCCGTGCGGGCGGTACGACTGCGTCGGGATCGCATCGTGGTC
GTGTTGGAGGGCGTGATTAAGGTGTTCACCTTCACTCAGCAACCACAGCA
GCTGCACGTCTTTGAGACCAGCTCAAATCCCAACGGGCTGTGTGTGCTGT
GCCCGCACAGCAATAAGAGCCTCCTCGCATTCCCCGGCCGTCGAACTGGC
CACGTTCAAATTGTTGATCTGGCCAACACAGAGCGGGCGCCGCTTGAGGT
GATCGCCCACGAGGCTGGTATCAGCTGTATTGCCCTTAATCTGCAAGGCA
CGCGACTAGCCACCGCCGGGGAAAAGGGCACCCTCATCCGTATCTTCGAT
ACGGAAAGTGGCAAGAAGGTATCAGAGCTGAGGCGCGGAAGCAACCACGC
CAACATATTCTGCATCAACTTTAACCACCAGTCCACAATGGTGGTCGTCG
CCTCCGATCATGGCACCATACACGTCTTCAACCTGGAGGACAACAAGCCC
CGTGAATCCTCGCTGCCCATAATACCCAAGTATTTCTCGAGCCAGTGGAG
TTTTGTCAAGTTTTCAATACCCCAGGGACCTCGATGTGTATGTGCCTTTG
GCGCCGATCCTAATTCGGTTGTGGCCATTTGTGCAGACGCCACTATATAA
ATTCCTATTTAACAATAAAGGCGAGTGCAGTCGAGACATCTGCACACAAT
TCCTTGAGCTGCAGACGATGAGACGCAAGCTTTCTAGAACCATTCGTTTG
GCCGCGGCCCAGTAGTGTCATAATCTAATCTAATCATAATCTAATCCACT
AGCTAGGAGATCTGGCCTGGACATGCCTGGAATTCTACCATAAAAGCGGG
CAACGAAGATCTGACAATCCAATGAATCCTAGAGTCATACTGAATTCCGT
TTCTCTCCCACGAGTA
FMO07628.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:33:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11975-RB | 1733 | CG11975-RB | 132..1150 | 9..1024 | 5020 | 99.7 | Plus |
| CG11975-RA | 1360 | CG11975-RA | 132..1150 | 9..1024 | 5020 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:33:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8993698..8994460 | 162..924 | 3815 | 100 | Plus |
| 3R | 32079331 | 3R | 8993534..8993624 | 74..164 | 455 | 100 | Plus |
| 3R | 32079331 | 3R | 8994526..8994629 | 924..1024 | 370 | 97.1 | Plus |
| 3R | 32079331 | 3R | 8993384..8993451 | 9..76 | 340 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 23:33:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 5793..5840 | 231..278 | 141 | 77.1 | Plus |
FMO07628.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:15:04 Download gff for
FMO07628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11975-RA | 121..1150 | 1..1029 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:26 Download gff for
FMO07628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11975-RA | 125..1154 | 1..1029 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:58 Download gff for
FMO07628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11975-RA | 125..1154 | 1..1029 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:58 Download gff for
FMO07628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8993377..8993450 | 1..75 | 94 | -> | Plus |
| 3R | 8993536..8993622 | 76..162 | 100 | -> | Plus |
| 3R | 8993699..8994460 | 163..924 | 100 | -> | Plus |
| 3R | 8994527..8994617 | 925..1013 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:26 Download gff for
FMO07628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4820249..4820339 | 925..1013 | 97 | == | Plus |
| arm_3R | 4819099..4819172 | 1..75 | 94 | -> | Plus |
| arm_3R | 4819258..4819344 | 76..162 | 100 | -> | Plus |
| arm_3R | 4819421..4820182 | 163..924 | 100 | -> | Plus |
