FMO07629.5prime Sequence
1221 bp (1036 high quality bases) assembled on 2008-11-03
> FMO07629.5prime
CAGTCGACATGAGCGCGGATGCGAGAATCAAGCAGATGGCGCCATCGCTG
GACACCACCGAACGGGAGAGGGAGCACCAGAACGTGGATGCCACCAACTC
GAACTCGGAGCCCAGTGCCAGCGATTGGGTGAACTTCTCGCAATGGATGC
ACTGCTTCTGCGTGGTCACCTTCGATCTAAATCTTGGGCAGGCGCTGGAG
CACGTCTATCCGCCGGCTTTCATGCCCAGCGACCAGGAGGTTAGCAACAT
TTGCTACATGGCCTTCCCGGACTCAAATTCCGGCTGCATGGGCGACACCA
AGTTCCACATGCGATTGCGCTGCACAACGCGTCGGGATTCCTTGCCGGGC
TACAATGCGGAATGCTCGCCGGCGCTGCGACAGGATGGCTCCCACTACTG
GGGCTTCGTCTACTTTCGCCAGAAGCGGGACGCGAATCTGCCGCGTGGTT
ACTTCCAGAAGAGCTTTATAATCATTACACGACTGCCGTTCTTCAATCTG
TACTACGACATACTCTCCCAGCTGGCGCCGCGCTACTTTGAGGAGGGCAC
CGACGTCCTGCGTCTGGCCAGCGAGCAAATTAATCGCCAGTGGCCCGGCC
TGCGAGTGGGTAAGCCGCTCCAGCTGCCTCTGCTGGATTGCAGCTATCAG
ATCTGCATACCGCGGACCAGCAGCAGTCGAAAGTCGACGGCCGATGGAGG
CATCGCAGGTGGTGCGGTGGAATCGCCACCAGCCATGGCTGCTTGCCCGG
CAGCCAAAGTGCTGGCCTCCGTTAATGAAATCGAACTCTTCCGCTCCCTG
GACTTTGTCATGGAGCAACTGTACACGCTGTGGGAGCTGGTCATCACCGC
CGAGCCCATTGTTGTCGTTGGCACCTCACCCGCCGACTGCTCCCACATGG
TGCAGACCCTTCTGGCCATGATTGCTCGCTGGAGTATTGCGCCGAGGCGC
GTCCCTACTTCACCATTCACGACAGCGAATTCGCGAATTCCCACAGGGGT
GCAGCAGCAAGACCACACTGCCCGCCTGCATTTTGGGCGTCACGAATCGT
TCTTTGTGAAGCTCTGAAGAATGCCGCCCATGCTGCGACTGGTGACAAAC
AAAGAAACATGCAACACACAGCATTGCTGCTGGTAAAAACGCAAGGAAAC
TCGAACGGCAATCAATTCAAGTTCAACGAATCTGGGTGGCGTATGGACAC
TGAATATGCCGAAACACCAAT
FMO07629.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3309-RA | 2614 | CG3309-RA | 79..1292 | 9..1204 | 5305 | 96.8 | Plus |
| CG3309-RB | 2611 | CG3309-RB | 79..1289 | 9..1204 | 5285 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5328178..5329269 | 1094..9 | 5120 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:35:53 has no hits.
FMO07629.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:15:03 Download gff for
FMO07629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3309-RA | 64..1182 | 1..1116 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:12 Download gff for
FMO07629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3309-RA | 78..1196 | 1..1116 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:45 Download gff for
FMO07629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3309-RA | 75..1193 | 1..1116 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:45 Download gff for
FMO07629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5328178..5329273 | 1..1094 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:12 Download gff for
FMO07629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5222211..5223306 | 1..1094 | 98 | | Minus |
