FMO07631.5prime Sequence
1215 bp (1005 high quality bases) assembled on 2008-11-03
> FMO07631.5prime
CAGTCGACATGCGGCCCAATTTGTTTTCCGGCGCCTCGCGGCTCTTGACT
TACAGCCGAAATGGAAAACTTCTGACTCGGGGAAGAAGCACCAAGGCCAC
GTCCAGCAGCTTGGACTCACAGCACCAGGATGCGGCGACCACGGAGGGTG
GAAGAGCGGAATCCGTAGAGGAGTCCCCGGAGCAGCAGCGAAAACTACCA
ACCAGAGAGCCGCTGGCCAAAAACTTCTTCATCGGAGTGGTGGACAAGGA
GCTGCTGGCCTATCCGGAGGTGATTCCACGGGATGAGATGGCCCAGCTGG
AGAATTCCCTGCTGCCGCTGAAGAACTACTTTGTGGAGCCACGTGAAACG
GAGGAGACCTCACCGGAGACCCTCCGCCAGCTGGGACTCTATGGGCTAAA
TGTGTCCACAGATTACGAGGGCAAAGGCTATGGCTGGAGTGCCAGTCTAA
TGGCCAGTGAGCCGGATTCAACGGATATCAATGTAACCCTGGGCCTGCAA
ACGCATCGCGTGGTCGTGGATCTTCTGAAAGAGGTTGGAACTCCGTTGCA
ACAGCAGAGGTATCTCCAGGACTTGGCCACTGGTAAACTGATAGGTACCG
AGGCTATATATGAGATATCTCCACCCGAGGAGGATTACTTTAACACCACG
GCAGAGTTGTTTCCCGAATACGGAAAGTGGCAGCTCAATGGCGAAAAATC
ATTCGTGATCTGCACACCCGGCGAGCGGCAGCTTTTCCTGGTTCTGGCCC
AAACCCAACAGCCGAATGTTCCGGGAGTTTTGGGACGTGGCACCACCATC
TTTCTGGTTGATTCCCAGCAGGAAGGAGTGCGCCTGGGCGAAAAGCACGC
CACATTCGGTTGCCGGAAAGCGGAAATTAGGCGTGTGCACTTCGAAGCGT
TAAGTTGGGAGAGGATCAGTGTGGGCCTACACACGATGGCACCGCTATTC
GGAGCAGCTGGTGCGATCCTCCCGCTGGAGGGCAGCTTGTGGGACTATCG
CTGTCAGAACTGCTAAACGATTGTCCAGTACACTGGTGAACACCACTCAG
TGCGGAGTACAACTGCAGACTGGAGCTCACCGCATCATATGTCGCGCCGA
GTGCTCGGTTACCGATTGAAGCATGCTCTAACTGACGCGGTGCTGATGAT
TCCGTCAGAAGTGGACCTGGAAGTCTATACAAGTACTTTTAGCCTGCCCA
ACCGAGGCGCTAGCT
FMO07631.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Egm-RA | 2033 | CG9006-RA | 53..1200 | 9..1136 | 5115 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11617901..11618971 | 1068..9 | 4745 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:03:16 has no hits.
FMO07631.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:15:00 Download gff for
FMO07631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Egm-RA | 32..1166 | 1..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:21 Download gff for
FMO07631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Egm-RA | 45..1179 | 1..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:31 Download gff for
FMO07631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Egm-RA | 45..1179 | 1..1116 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:31 Download gff for
FMO07631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11617902..11618978 | 1..1067 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:21 Download gff for
FMO07631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7505407..7506483 | 1..1067 | 98 | | Minus |
