FMO07635.5prime Sequence
1203 bp (1044 high quality bases) assembled on 2008-11-03
> FMO07635.5prime
CAGTCGACATGGAACCCTCATATGATCACGAACATCCACATCATCTGCTA
ACAAATTACAATTCGAAAAAGTATCCGCACGTCTCGCGCACTCCGGAGTA
CAGTCACTCCACCGGCAGCGATTATCCGGAGCACGGTGGCTATCTGACGG
ATGGACGCCTGATGCACGAGAGCAACAGCGATGCCGGGATCTACCACGTG
CGCCAGGGAAGCGAGCACTCCTCGCCCAGTCTGCACTCGCCAGCCATACA
GAGCTCCGGATACGAGAATGAGCACCTGAACGAGGCGGTTCTGGCCGCGC
ACAGCCACAGTCACTCGCCCATGCCGATGGTGTCCAGTGCCTATGTGGGC
GGAGGAACTGCCTCCGGATCGCTGATTAACAGCAATATTCCTCTGCTCGG
TGGCGGCGGTAATTCCGTACTGAACAAATTTCTATCGCATCCGCACGCTG
GCATGGTGGGCGGTGGAACCGGACAGATGGAGGACTGCACATCGCACTCG
CCAATTGAAGCGGCGTCCATGTGGAGCTACGACTACAAGGGCGACCTGTG
CGCGCCCAATTGTGGCTATCTGGAGCGACACAAGCCGCTGCCCGCCGACC
TTAAGTATCGGCCCGGCGGAACCCAGTCAAAAAGTGCCAAAGAATCGCGC
ATCCGGCGGCCGATGAACGCCTTCATGGTCTGGGCCAAGATCGAGCGCAA
GAAGCTGGCCGACGAGAATCTCGATCTGCATAATGCCGACCTCAGCAAGA
TGTTGGAAAAAAATGGCGATCGCTGACGCCGCAAGATCGCAGACCCTACG
TGGAGGAGGCGGAGCGTCTGCGGGTGATTCACATGACGGAGCATCCGAAC
TACAAGTACCGACCCCGACGACGCAAGCAGTCCAAGCTGCGGGCCATGCA
GCCGGGCGGCAAGGAGCAGAGCGAGAGTTCACCCAATCCGGGCACTGGTG
GATCCAAGTCGATTCCCAAGCTGGCCACACCACCGTTGGCCACCGCATCA
TCCAGCTTATACACGCCCACGACGAAAGCACTTGCAATTCCACGAACAAA
ATACGGACATCACTCGGTTGGCTGTACGAGCAACCGCTGAAGCCCACGTA
CTTCGCCCAGTCTTGGACTTGTCTACGCAATGCGAAGGCAGTACAGAATC
GAGTCACTGGGCCGCACACGTTCGCGCCCGCCCGCTTCAAATGAATTCGC
TGT
FMO07635.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sox15-RA | 3651 | CG8404-RA | 1074..2256 | 9..1183 | 5225 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14203358..14204052 | 756..62 | 3460 | 99.9 | Minus |
| 2R | 25286936 | 2R | 14202866..14203220 | 1102..755 | 1325 | 93.5 | Minus |
| 2R | 25286936 | 2R | 14211288..14211340 | 61..9 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:38:58 has no hits.
FMO07635.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:15:10 Download gff for
FMO07635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sox15-RA | 1070..2246 | 9..1175 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:51 Download gff for
FMO07635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sox15-RA | 1074..2250 | 9..1175 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:13:33 Download gff for
FMO07635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sox15-RA | 1074..2250 | 9..1175 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:13:33 Download gff for
FMO07635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14202866..14203219 | 757..1102 | 96 | <- | Minus |
| 2R | 14203358..14204052 | 62..756 | 99 | <- | Minus |
| 2R | 14211288..14211340 | 9..61 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:51 Download gff for
FMO07635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10090371..10090724 | 757..1102 | 96 | <- | Minus |
| arm_2R | 10090863..10091557 | 62..756 | 99 | <- | Minus |
| arm_2R | 10098793..10098845 | 9..61 | 100 | | Minus |
