FMO07637.5prime Sequence
770 bp (738 high quality bases) assembled on 2008-11-03
> FMO07637.5prime
CATTCGACATGCAGGAACTCGATATATCGATACCATCTACGGATTTTGCA
TCGCAGTTATTATTATTATTTTTTTACAACAAAATGCAGAGCCAGCGGTT
TCTATTCGTGGCCATTTTGGCCTGTTTTCTGGTGACTATCAAATCCACGC
CCCTCAGCGACATATCGTATTCGGATGAATCGACTTCGGTGAATGAGAAG
ACACAGAAACGTCCAGACGATGACAGTGAATTCGATGGTTTCCCCTTTCG
GGAAGATGATGATTCTCTGCAAGACTCGTCGAGGGAGATGTCTGTGCATG
ATCACAACTGGGATGTGCTGATTTTCACGCAACAATGGCCGGTGACCACT
TGCTATCATTGGCGCGAGGAGAATCCCGACCAGGAGTGCAGTCTGCCCCA
GAAAAAGGAGTTCTGGACCATTCACGGCATCTGGCCAACGAAACTGCACC
AAATGGGACCGAATTTCTGCAATAACTCGGCCAACTTTGATCCAAGCAAA
CTGAATCCCATTGAGGATCGACTGGAGACCTTTTGGCCGGATCTCAAAGG
CATGGACTCCACGGAGTGGCTTTGGAAACACGAGTGGCAGAAGCACGGAA
CATGCGCCATGCTGGTGGAGGAACTGGAAACGAACTCAAGTACTTTCGAG
CAGGGGCTTCACTTGGCGTGAGGAGTACATCATGTCGCGCATTCTAGACG
CCTCGGACATCCATCCCGATTCCAACAATACGGTGGCGGCCATCAATAAT
GCGATAGTCAAGGGACTATG
FMO07637.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RNaseX25-RA | 1663 | CG8194-RA | 2..765 | 4..768 | 3680 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7970939..7971551 | 155..768 | 2880 | 99 | Plus |
| 3L | 28110227 | 3L | 7970589..7970742 | 4..157 | 740 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:00:17 has no hits.
FMO07637.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:14:53 Download gff for
FMO07637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RNaseX25-RA | 1..761 | 8..770 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:46 Download gff for
FMO07637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RNaseX25-RA | 2..766 | 4..770 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:34 Download gff for
FMO07637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RNaseX25-RA | 2..766 | 4..770 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:34 Download gff for
FMO07637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7970587..7970742 | 1..157 | 98 | -> | Plus |
| 3L | 7970942..7971552 | 158..770 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:46 Download gff for
FMO07637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7963687..7963842 | 1..157 | 98 | -> | Plus |
| arm_3L | 7964042..7964652 | 158..770 | 98 | | Plus |
