FMO07643.5prime Sequence
913 bp (913 high quality bases) assembled on 2008-11-03
> FMO07643.5prime
CAGTCGACATGAATAGTCTCCTGCGACAAGGACTCCGCCTGGGCTGCTGC
CTTCCGGCTGTCCAGCAGCAAATCCACACCACCGCCGTGCACAGGACATT
CTGGGAGCGCGAGAAAAAGTCCGGCTACAAGACCAAGCTGCCGGAACCCT
CGAAGAAGCAGATGATCATGGACGGATTGAGGGACCTTAAAGAGGAGATG
AAGCTGTGGCGCCAGGAGGTCAAGGAGCAGTTCGAAAGTGATCCCATCCT
GGTCTTCCGGCCGGGTGAAACGGATGTGGTGTTCGATTTCAAGGCGCCGG
ATGTGCTGGACAAGTGGACGGTGACCACCGATGCGGATCACGGCGAGGGC
AAGAGTACTGCCACTCTGGAACTAAGTGCAGCCGGTGCTGGACTCTTCCA
TGGCCAAGTCAACTCGGATCACACCAAGGATGGCATTATCAAAAGGACGG
GATATGCGAACATTCGCACGAAGAGAGTGCGGAAATCCTTTAAGCGCGAG
ACCACCTATGACTGGACGCAGTACAACATGCTGGTCATGAAGGTGCGAGG
CGATGGACGCAGCTACCTGATCAACCTGCATACCGAAGGCTACTTCGACC
TGATGTGGAACGACATCTACCACTATGTTCTGTACACGCGCGGAGGTCCC
CACTGGCAGATAGCGAAGATTCCCTTCTCCAAGTTCTTCCTGTCTTCCAA
GGGACGTGTCCAGGATCGCCAGGGCGCCATACCGCTGAACAGGGTAACCC
ACTTCGGATTCTCCGTTGCCGCAAAGAAGGGAATGGATGGCCCGTTTGGC
CTGCAAATAGACTATGTGGGTCTGGAGTACGATCCCAGTCACCGCGAGGA
ATTCGCCTACGAATGTACCAGACTCCCAAATACATCGTGGCCACAGCAAG
CTTTCTAGACCAT
FMO07643.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7598-RA | 1048 | CG7598-RA | 80..966 | 9..894 | 4305 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29737044..29737517 | 9..482 | 2295 | 98.9 | Plus |
| 3R | 32079331 | 3R | 29737575..29737988 | 482..894 | 1990 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:31:00 has no hits.
FMO07643.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:14:36 Download gff for
FMO07643.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7598-RA | 65..965 | 1..899 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:53 Download gff for
FMO07643.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7598-RA | 70..970 | 1..899 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:48 Download gff for
FMO07643.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7598-RA | 70..970 | 1..899 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:48 Download gff for
FMO07643.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29737034..29737517 | 1..482 | 98 | -> | Plus |
| 3R | 29737576..29737992 | 483..899 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:53 Download gff for
FMO07643.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25562756..25563239 | 1..482 | 98 | -> | Plus |
| arm_3R | 25563298..25563714 | 483..899 | 98 | | Plus |
