FMO07651.5prime Sequence
1199 bp (1006 high quality bases) assembled on 2008-11-03
> FMO07651.5prime
CAGTCGACATGGACTTTGACAATGCGAAAGAGAACATTCAGCCGCTGGCC
AGCGGTCGCAATGTGAGCCTTCTGCAGGCTTCTCTTAGCCAGGACTCCAC
CCACGGCCAGGAACTGCTGGCACAACGCAAGCAAATGGAGGAGGAGGTGC
GCACCTACAAAGGCGCGGATCCTCTCGGTGCCTGGTACACGTTCATCTGC
TGGATCGAGCAGAGCTATCCGGCGGGGGGCAGTGGCTCCGGTCTGCAGAC
TGTCCTACACCAGTGCCTCACCAAATTTGAAGACGACGAGCGCTACCGTC
AGGACAAGCGGCTTATAAAGCTTTTCATTAAATTCATGGAGAAACAGAAG
GACAAGATCGAGTTTTATCAGCAGATGTACAACAACGGGATCGGAACAAT
GCTGGCAGATTTCTACATTGCTTGGGCCTACAGCTACGACCTGAGCGGTA
ACATGCGCAAGGCCGACGAGATCTTTCGCTTAGGTCTAGAGTGCCGCGCA
GAGCCCTTAGAGGATCTGAAGGAGGCCCACCACCACTTTGGCTATACGGT
GGGCCAGCGCATGCTCTACAGCACTGGTGAAGAGGCCAACGCAGTAAACC
AGGAACTTAACGAGCGACGGCTAGCACTGCAATCACTTCATGGTCGCCGG
CAGCAGATCTCTAACAGCATCACCGTGGGCAGCATCCGTACCGGAGCAGC
AGTTAAAAGCGGCCTCCCAGGCGTGGTTCAAGTCGAGCCTTCAACCACCA
CCAGTAGGCGCAATGTATGTCGGAACGTTGAGGTGTTTAATGACGAAAAT
TCTGAGGGAAATATTCCGATCTCTAATTCTGAGACGGAGGTGAAGTCAAG
CCTGCGATCCATTATCGACTCGGCTTGCAGTCAGGAGAATATAAAAGACC
GGTGGCCTGGAATAAGGCAAATGCTAAACGCCACAAACATGTAAAATTTC
GCAGTAACGACCTCGCCGGATCTGGGCTTTGATATACACGTTGACGACAG
CAATGCCACTATACAACTACGATCGTCGTCTAGAACACCATTAAATTCGA
CAACTTTGTGACCAAAAACAGCCTCAGACGTGGGGACTCAGTTCTATGAA
GACGACTAAGCGAATGACTGCTTGCTATACCAGGTTTCTTACCGCTCAAC
TAGTCGCCCGAAGAGATCGAGCCAATCTTTCTCGTGAGAGGACTGGCGC
FMO07651.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BubR1-RA | 4626 | CG7838-RA | 99..1185 | 5..1077 | 4940 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5973499..5973893 | 730..336 | 1975 | 100 | Minus |
| 2R | 25286936 | 2R | 5973957..5974287 | 335..5 | 1640 | 99.7 | Minus |
| 2R | 25286936 | 2R | 5972853..5973121 | 997..732 | 1110 | 96.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:30:32 has no hits.
FMO07651.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:14:27 Download gff for
FMO07651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BubR1-RA | 326..1371 | 1..1037 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:46 Download gff for
FMO07651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BubR1-RA | 94..1139 | 1..1037 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:34 Download gff for
FMO07651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BubR1-RA | 94..1139 | 1..1037 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:34 Download gff for
FMO07651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5972808..5973121 | 732..1037 | 95 | <- | Minus |
| 2R | 5973498..5973893 | 336..731 | 99 | <- | Minus |
| 2R | 5973957..5974288 | 1..335 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:46 Download gff for
FMO07651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1860313..1860626 | 732..1037 | 95 | <- | Minus |
| arm_2R | 1861003..1861398 | 336..731 | 99 | <- | Minus |
| arm_2R | 1861462..1861793 | 1..335 | 98 | | Minus |
