FMO07655.5prime Sequence
1220 bp (1069 high quality bases) assembled on 2008-11-03
> FMO07655.5prime
CAGTCGACATGGTACGTCAGCAGAAGACCAGCAAGTCCACAAGCTTATCG
AAGCCCACTCCAATTGCCCAGAAGCCCAAGCCAATTGCCCAGAAGCACAC
TCACGGCAATAAGTACCACTACCAGCAACGGAATAAGCAGCCGAATCATC
AGCCGGATCAAGAAATAGGAAGAGCAGCTAAGTGTGAGAATCAGGCTATA
GCCGAGCATAAACAAGATCTAACGGGCATCATAACCCAAGAGCTGTTTGA
AAGTTTCAATAATATTCAAGGTCCGTTTTCGGAAAACCTGCAGGTTTTCA
ACAAAAATCCAGAATATATCACAAGGCGAAAGAAAGAGCTTAAGAAAGAA
GACGATCTAGATCGTGGTCAAATAACGAAGGAAGTCGCTAGGGAAAAACA
GAAGGAAAAAGAAACCCGCGATCGGGCTGTGACGGAAACGATCTTCGTAA
CAATTGAGAACAAAAAGGCACCAGTCATGAATGGACATGGACCAAGGCAC
GTTAAAGTGGCTAACGGACAAGACAAACACAATGACGGCAAACCTCCGCT
GCGTGCCATACTGGGCAACAGTGCTTCGCAGCGCCAGCAAGATACAAGCA
CCGTCTATCACAGCCCTGAATCCTCATTCAAGCGGCCACGTCATCCGCGA
GTAATGTACCCTGGTCACCAGCGCACCACGGGCGTCTCTGTGAATCACAG
ATTGAAAGTAACGCCGCAATCGGATGCACCCACGCCAGCGGTAGCGCCCA
TCACGCCGCCAGCTTCGCCGGAATACGCTCAAACGACAACCGCCGCTAAA
GCGACGTACAAAGAAGATATCCACGGAGGTCAAGGTGAAACAGGCAATGT
CGTTACAAATCCAAAAGTTAAAGTGCCACTTAAATTCGATCCCTCACTTG
ATCCCGTCTCACGCTCAACTTCTATTGCGCGGCAATGACTTTGAGAACCT
GCATACACATATCAACAGCTACGGAACTACATTGTTCAGTGCAAATCGCT
GGCGATGTTTACAGTAGCTATCCGCAGAGTTCACCGATAGAGACAGCATA
CAACGCACAGCACAGATCGCATCAGCGCATCATGCATGCCCAGTCAACCT
AAGCTTTCTGTCTGCCATTTAACGAATGTGGATTATCGAATGGAATGCCA
GACGTAGACCAATGGCATATGGTTCAAGCCTGGAAGAATTGGATACGGGG
ACACCTCTCCGGGCAACATA
FMO07655.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8920-RD | 3272 | CG8920-RD | 435..1582 | 9..1139 | 5215 | 97.9 | Plus |
| CG8920-RF | 3753 | CG8920-RF | 183..1330 | 9..1139 | 5215 | 97.9 | Plus |
| CG8920-RA | 3079 | CG8920-RA | 242..1389 | 9..1139 | 5215 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20321726..20322826 | 9..1096 | 4880 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:36:51 has no hits.
FMO07655.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:14:21 Download gff for
FMO07655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8920-RC | 453..1574 | 5..1113 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:49 Download gff for
FMO07655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8920-RA | 239..1360 | 5..1113 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:00 Download gff for
FMO07655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8920-RA | 239..1360 | 5..1113 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:00 Download gff for
FMO07655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20321723..20322826 | 5..1096 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:49 Download gff for
FMO07655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16209228..16210331 | 5..1096 | 98 | == | Plus |
