FMO07661.5prime Sequence
1235 bp (1030 high quality bases) assembled on 2008-11-03
> FMO07661.5prime
CAGTCGACATGCCAGCGAAACGCAGCAGAACATTCCGGCAATCCGGATCC
GCGCTACTTGCTCTTCTGGCGATCATTCTCTTAATGAACATATCCTGTAC
GAGCGCTGCCCGCGATCACAGGCGGCAGACCAACCTGGAGGCCAAGGTGG
GCTCCCACGTGGTCTTCAACTGCTACATCGATTTCCCCTTCGATGCCCCC
ATTCCCTACTTGGTGCACTGGACAAAGGATAACAAGAAAATCTTCACCTG
GTACGAGCAGGAGACCTCCACCAGTGAGCTATTCAATGGCCGATTGCACC
TGGTCGAGAACCATCCGGAATTTGGACGCGCCTCCGTGAATCTGACCGCC
ATTCGGGAATCGGACCAGGGTTGGTACCACTGCCAAGTTAGCTTTCCCAA
TCGCTCGCCCTCGGTTCGCAACAATGGCACGGCCTACCACCTGGCCGTCC
AGGGTGGCTCCCTCATCCGCATTCCGCCGGTGAATCAGACGATCCGGGAG
GGACAGACCGCCTTCTTTCACTGCGTGATGAAGCATCCGGAGAACTCGCA
GGCCTCCTGGTACAAGGATGGCGTGCTGCTGCAAGAGGTCCAGGATCTGG
TGCGCAGATTCTACATGGGTCCCGATGGCAGCCTCAGCATCGATCCCACC
ATGATGAGCGACCTGGGCGAGTACGAGTGCAAGGTGCGCAACAGCGATGG
CGAACTGCAGACGGCCAAGGCCTTTCTCAACATACAATATAAGGCCAAGG
TGATTTACGCCCCGCCGGAGGTTTTCTGCCGTACGGCCAGCCCGCCGTGC
TCGATTGTCACTTCCGGGCGAATCCGCCGCTGAAAAATTGCGCTGGGAGA
AGGACGGCCTGCTCTTCGACTCGTAACATGTGCCCGGGTCTTCTACAAGA
TGAACGGCAGCCTGTTCTTCGCCAAAGTGGACGAGACCATGCCGGCAGCT
ACACTTGCACGCCTACACGACCTCGGCACGGACGGAACATCGCGGTCATC
AGCGTGATTGTGCTCGACGGCCATCTTCAGCGCACGCCCAGGCCATCTAC
ATCCAGAAGCTGGGCGAGCCGCGAGCTGCCCTGCAGCATCGACGGAACGA
ACATCGGCCCTCATTACTGGGCAGAACGACTGCGGAGTCTCACGGGATGA
CGATGGAGACGATAGTCGAAGGCAAGGACCTGATCCGCATCGCCAGCTAC
GCACTCCTAATGTAGCAAGCTGATGGAGCTCGATG
FMO07661.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16857-RA | 2730 | CG16857-RA | 350..1443 | 4..1084 | 5040 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4328938..4329445 | 231..738 | 2540 | 100 | Plus |
| 2L | 23513712 | 2L | 4324903..4325129 | 4..230 | 1105 | 99.1 | Plus |
| 2L | 23513712 | 2L | 4329511..4329851 | 739..1068 | 1085 | 94.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:14:49 has no hits.
FMO07661.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:14:14 Download gff for
FMO07661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16857-RA | 329..1436 | 1..1093 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:34 Download gff for
FMO07661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16857-RA | 348..1455 | 1..1093 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:30 Download gff for
FMO07661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16857-RA | 348..1455 | 1..1093 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:30 Download gff for
FMO07661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4324901..4325129 | 1..230 | 98 | -> | Plus |
| 2L | 4328938..4329445 | 231..738 | 100 | -> | Plus |
| 2L | 4329511..4329881 | 739..1093 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:34 Download gff for
FMO07661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4324901..4325129 | 1..230 | 98 | -> | Plus |
| arm_2L | 4328938..4329445 | 231..738 | 100 | -> | Plus |
| arm_2L | 4329511..4329881 | 739..1093 | 94 | | Plus |
