Clone FMO07668 Report

Search the DGRC for FMO07668

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:76
Well:68
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG4729-RD
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07668.5prime Sequence

455 bp (127 high quality bases) assembled on 2008-11-03

> FMO07668.5prime
CAATCCACATGCTGAGTTTGCTGCATGGAAAGAGCGGGGAACCGCACCTG
CTGATGAGGCGTATTCCACTGGAACAGGTTCCGGAGGATGAGAAGGAGGC
GGCCGCCTGGCTGCGCAACCTGTTCGTGGAGAAGGACAAGATCATCGATA
GCTTCCTGGAGACGGGCAGCTTCTTTAAGACGTCCGGCATAAAGGAGGTT
CCGGCATATGTGAATAAACGCCGGCTGTGCTCACTCGAGAACTTTGTCTG
CTGGGCGGTATTCTCTCTGTCCTGCATTTTCTACTACTTGATCACATCCC
TGCTGGCGGCCAACTGGACGGCCTTTATCACCGCACTTTCCGTCCTGGGA
CTTTTTTACTGGCTCATGGGTCAGGCCATCAACAAGACGCAGATCAGCAA
GGCATCTAATTATGGATCCTCCCAGTCGGTCGCAAAGGCAAGCTTTCTAG
ACCAT

FMO07668.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG4729-RE 1849 CG4729-RE 1118..1546 9..437 2055 98.6 Plus
CG4729-RD 845 CG4729-RD 114..542 9..437 2055 98.6 Plus
CG4729-RB 1672 CG4729-RB 941..1369 9..437 2055 98.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16382382..16382727 354..9 1655 98.6 Minus
3L 28110227 3L 16382075..16382157 437..355 400 98.8 Minus
3L 28110227 3L 16379425..16379558 199..66 295 81.3 Minus
Blast to na_te.dros performed on 2014-11-28 20:35:43 has no hits.

FMO07668.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:14:06 Download gff for FMO07668.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4729-RB 932..1377 1..447 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:08 Download gff for FMO07668.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4729-RB 932..1377 1..447 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:41 Download gff for FMO07668.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4729-RB 932..1377 1..447 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:41 Download gff for FMO07668.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 16382067..16382157 355..447 95 <- Minus
3L 16382382..16382731 1..354 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:08 Download gff for FMO07668.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16375482..16375831 1..354 97   Minus
arm_3L 16375167..16375257 355..447 95 <- Minus