FMO07668.5prime Sequence
455 bp (127 high quality bases) assembled on 2008-11-03
> FMO07668.5prime
CAATCCACATGCTGAGTTTGCTGCATGGAAAGAGCGGGGAACCGCACCTG
CTGATGAGGCGTATTCCACTGGAACAGGTTCCGGAGGATGAGAAGGAGGC
GGCCGCCTGGCTGCGCAACCTGTTCGTGGAGAAGGACAAGATCATCGATA
GCTTCCTGGAGACGGGCAGCTTCTTTAAGACGTCCGGCATAAAGGAGGTT
CCGGCATATGTGAATAAACGCCGGCTGTGCTCACTCGAGAACTTTGTCTG
CTGGGCGGTATTCTCTCTGTCCTGCATTTTCTACTACTTGATCACATCCC
TGCTGGCGGCCAACTGGACGGCCTTTATCACCGCACTTTCCGTCCTGGGA
CTTTTTTACTGGCTCATGGGTCAGGCCATCAACAAGACGCAGATCAGCAA
GGCATCTAATTATGGATCCTCCCAGTCGGTCGCAAAGGCAAGCTTTCTAG
ACCAT
FMO07668.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4729-RE | 1849 | CG4729-RE | 1118..1546 | 9..437 | 2055 | 98.6 | Plus |
CG4729-RD | 845 | CG4729-RD | 114..542 | 9..437 | 2055 | 98.6 | Plus |
CG4729-RB | 1672 | CG4729-RB | 941..1369 | 9..437 | 2055 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16382382..16382727 | 354..9 | 1655 | 98.6 | Minus |
3L | 28110227 | 3L | 16382075..16382157 | 437..355 | 400 | 98.8 | Minus |
3L | 28110227 | 3L | 16379425..16379558 | 199..66 | 295 | 81.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:35:43 has no hits.
FMO07668.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:14:06 Download gff for
FMO07668.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4729-RB | 932..1377 | 1..447 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:08 Download gff for
FMO07668.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4729-RB | 932..1377 | 1..447 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:41 Download gff for
FMO07668.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4729-RB | 932..1377 | 1..447 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:41 Download gff for
FMO07668.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16382067..16382157 | 355..447 | 95 | <- | Minus |
3L | 16382382..16382731 | 1..354 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:08 Download gff for
FMO07668.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16375482..16375831 | 1..354 | 97 | | Minus |
arm_3L | 16375167..16375257 | 355..447 | 95 | <- | Minus |