FMO07674.5prime Sequence
1190 bp (1043 high quality bases) assembled on 2008-11-03
> FMO07674.5prime
CAGTCGACATGTCCAAGGGATCGGTGTTGCCACAATATATTGCTGGCTTG
TCGGCCAGCTTTGGTGCCCTCTGCATGGGCGCCTCCATTGGTTGGTCCTC
GCCCGTGGAGAATATGATAACGGTGAACACGGAATACGGCTTTCCCATTA
GCTCCAGTCAGTTCGGCTGGGTATCCTCGCTGCTGACCCTGGGCGCCACT
GTGATCTGCATTCCCATTGGTTTCGCCATCGATTGGATCGGCAGGAGACC
CACTATGTTAGCCCTAATTCCACCGTACATGGTGGGCTGGGTGCTGATGC
TGTTCGCCAAAAACGTGACCATGCTCTACTTCGGACGATTCATTCTTGGC
ATGTGCGGCGGAGCCTTTTGCGTAACAGCTCCCATGTACTGTACAGAGAT
TACGGCGACAGCACTACGAGGCACCATCGGATCCTTTTTCCAGCTGCTGA
TTGTGTCGGGCGTGCTGTACGGCTATTTGGTGGGCGCCTTCCTGCCCCTG
CTCACCATCAATATCCTGTGCGCTATTCTGCCCGTAATCTTTGCTATCAT
ACACTTCTTCATGCCGGAGTCACCCGTCTACCTGGCCATGAAGGGACGCA
ACGATGATGCCGCCAAGGCCTTGCAGTGGCTGCGCGGCAAGGATGCCGAT
ATCGATGACGAGCTCAAGGAGATCCTGGAGGAGTCCCAGAAGCAGATTGA
TATGCCACAGGTCAACATTCTGTCCTCCCTTCGTCGACCCATCGTCCTGA
AGGGTCTTGGAATCGCTGTGCTCCTGCAGGTCTTCCAGCAGTGGACGGGA
ATCAACGCCGTTCTCTTCTACTCCGCCTCCATTTTCGAGGATACGGGCTC
TGACATAAGTGGCAGCGATGCCACGCTTATCATTGGAGTCACCCAAGTGA
CCAGCACGCTGGTTGCCGTGGCCATTATCGACAGGCTGGCCGTCGCATCC
TGCTCCTTATCTCTGGCGTCTGATGCCGTGTCCACTGCACTGATGGGCGT
GTACTTTCAGCTAAAGGAGAACGATCGCTTCAATGGACAATTTCGTGTGC
GATCAGCAGTATCTGCATTTTCATAATCTTCTACTCGATGAATCGACGGG
TGCATGCTGTATGCGACTTTCTCGGAGAATTAAAGTGCAGATCATGCGAA
CAGACTGCTTCGCCTCTGGGTACCGTGTTCCTTCAATCTC
FMO07674.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:40:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6484-RA | 1590 | CG6484-RA | 65..1160 | 4..1089 | 5230 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:40:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17583240..17583948 | 712..4 | 3530 | 99.9 | Minus |
| 2R | 25286936 | 2R | 17582437..17582828 | 1089..708 | 1590 | 96.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:40:52 has no hits.
FMO07674.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:09:22 Download gff for
FMO07674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6484-RA | 59..1162 | 1..1093 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:35:52 Download gff for
FMO07674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6484-RA | 62..1165 | 1..1093 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:35 Download gff for
FMO07674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6484-RA | 62..1165 | 1..1093 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:35 Download gff for
FMO07674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17582437..17582825 | 711..1089 | 97 | <- | Minus |
| 2R | 17583242..17583949 | 1..710 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:35:52 Download gff for
FMO07674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13469942..13470330 | 711..1089 | 97 | <- | Minus |
| arm_2R | 13470747..13471454 | 1..710 | 99 | | Minus |
