FMO07675.5prime Sequence
1204 bp (1021 high quality bases) assembled on 2008-11-03
> FMO07675.5prime
CAGTCGACATGCGCTTTCTTGTTCTCTCAACACTGCTTCTGGCCTCTTTG
GCACTTGGCCAGGCTCAACAGCACGGTGGACTGGCCGTCGAAATTCAGAA
GCAGCGGCTGGTCAAATTTCCCGAGGACTTTGAGCCCAATGCGGCCACTC
CGTCCTCGGAAAAGGCGGACGAGGCCAAGCGCATCCTCGAGCAGATAGCC
AAGGTTAACGAGGCCTTTGGCTACGTGAAGAAGCAGCCGGAGCAGCCCAA
GCTGCCACCGATCCTTGATTCCAGTCAATACCTGTTCCCCAAGCCCGCCC
ATCAGCCATTTCACGCCCATCAGCACCACTTCTCGGGAAGTAATGGTCAG
ACCTTGTTAGAACCCTCAATTAGGGCGGTGAAACTCACAAGAAATGTGGC
GGGCAGTTACAATGTGCCTCCCAGGTTGCGCCAGGCAATTGAGAGCACCT
CCAAGGAGGAGAAGAAAGCGCAACTCTACTTCCGACCCAAACAGGTGGAG
GTACCGAAGCCGAGTTCCGAACAAGAAGCACAGCAGCTGCCCGCCCACTT
TGTGGTGCCCGTGCACCTGTACAAACTCAATAAGGAGGAGTATCTCAAGG
AGCACGCCTCGCAGGAATACAAGATAAAGGGATACAAAATCATTGGCGAT
GTGGACAGCTTCTATGGCAAGGCGAAGGCTGGAAGAAACAGGGCAAGACG
ACGCCCAAGTATCACCTGTTCTTCCTGCCCCGAGAACTGGCTCTCAATGA
AGATGGCACCCCAAAAAGGGGTATTCCACCACCATTGGTACGACCACCAC
AAAGGCTCCAGTGCCTGTGAACTTCAAGGAATATCGTTTGGACTCCCGCG
AGAAGCCCGTGCATAAGCCACAGAAGATTCAGCCCACTTCGTCACGGAAT
TAAATTCTTTGAACAGAAAGAAGGTTGGTTCCACAGCGAAACCCGTTCGC
CTGGAGTGGAAAGGATGCTGAACAGCAAATCCTACCAAGGGATCCACATT
CCCTAATATCAGCTACATCTGCGCTGTTCTGGTGAGTTCTACTTACCAGC
ATCTGGTGGCTGCTGCCCAATCGATCGCTAGTCAATCGCAATGCCCGGAT
GAAATATAGCTGAAATGCCGAATCGACCTGCACTGCATCGAATGCCTTTC
AACCTGTCAGCTCCCTCCGAACTTCTAAGTGCCGCGCCACAGTGTGTGAA
ACAA
FMO07675.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11905-RD | 2251 | CG11905-RD | 329..1486 | 9..1152 | 5100 | 97 | Plus |
| CG11905-RG | 2069 | CG11905-RG | 147..1304 | 9..1152 | 5100 | 97 | Plus |
| CG11905-RA | 2192 | CG11905-RA | 270..1427 | 9..1152 | 5100 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16932025..16933011 | 1073..92 | 4345 | 98.3 | Minus |
| 3L | 28110227 | 3L | 16933293..16933360 | 91..24 | 340 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:36:36 has no hits.
FMO07675.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:09:21 Download gff for
FMO07675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11905-RD | 299..1375 | 1..1073 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:01 Download gff for
FMO07675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11905-RA | 263..1339 | 1..1073 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:08 Download gff for
FMO07675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11905-RA | 263..1339 | 1..1073 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:08 Download gff for
FMO07675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16931937..16933011 | 92..1152 | 96 | <- | Minus |
| 3L | 16933293..16933367 | 14..91 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:01 Download gff for
FMO07675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16925037..16926111 | 92..1152 | 96 | <- | Minus |
| arm_3L | 16926393..16926467 | 14..91 | 94 | | Minus |
