FMO07677.5prime Sequence
1143 bp (992 high quality bases) assembled on 2008-11-03
> FMO07677.5prime
CAGTCGACATGATTCGCAACGTAGTGGTGGGCGTGTCGGGCGGCGTGGAC
AGCGCCGTTTCCGCCCACCTGCTGGCGGAGCAAGGATTCAAGGTGCTGGG
TGTGTTTATGCGCAACTGGGATGAGGCGGACGAAGTGGGTCGCTGCAGTG
GGGAGGCGGATCTGAAGGACGCCGAGTGGGCGTGCCGGCAGCTCGGCGTG
GAGCTGCGTCAGGTGAACTATGTGCGCGAGTACTGGACGGCGGTGTTCAG
CCAGTTTCTGGACGATTACCAAATGGGCTTGACACCAAATCCGGACATCC
TGTGCAATCGCCACATTAAGTTTGACCTCTTTCACAAGCACGCCTTGGAA
AATCTCGGCTACGATGCCGTGGCCACGGGTCACTACGCCCGGAATAGTCT
GGGCAACTACCTGGAGGGGATTGCCTCCAACAACGACGCCCGCTTGCTAA
TACCCGCCGATACGTTCAAGGACCAGACATTCTTTTTGGCAGGTATTTCC
CGAAAGGCTCTGCAACGCACGATGTTCCCTTTGGGAGACTTCCAGAAGAG
CCAGGTCAAGGACTTGGCCAAGAAGATTGGCTTCCAGCGACTGGCCAAAA
AGAAGGAAAGCACTGGCATTTGTTTCGTTGGCAAACGCAACTTCAAGGAC
TTCATACAGGAGTACATCACTTCCAAACGTGGTCCCTTCCTAGACATCGA
CAGTGGAGCCGTTGTCGGCCACCACGAGGGCCTCCATCAATGGACTGTGG
GCCAGCGGTGCCGTCTGAGCTCATTCCTTCAGCCCTATTTTGTGGCCAGG
AAAGAGGCCGCAAGCAATACCATCTATGTGGCATCTGGCCACAACCATCC
CGCCCTTCTCAGCACCACATAGCCGTCGATCCGCCCAACTGGCTGTGTTC
CAAAGTCCCAACAGATTCTTTCGGACACTGGCAGCTTGAGGTGTCGCTTT
TCGATTCCAGCACCACCAAACCATTGGTGGACTGTCAGCTGGACCATCCC
TCCCAGTTACACTTTTCTTGTCAGTTGGACGCTCCTTTAAGAGCTATTAC
ACCAGACATATGCCGTATTCTATGACGACCAGCTTGGTTGGTTTCGTCGC
ATCCTCACGCTTATCCCCATAAGAAAAACGCCGAAGCTCGAGA
FMO07677.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3021-RA | 1412 | CG3021-RA | 103..1226 | 9..1128 | 5200 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1026893..1027546 | 9..662 | 3270 | 100 | Plus |
| X | 23542271 | X | 1027633..1028069 | 661..1096 | 1670 | 96.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:02:48 has no hits.
FMO07677.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:09:18 Download gff for
FMO07677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3021-RA | 30..1125 | 1..1096 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:02 Download gff for
FMO07677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3021-RA | 96..1191 | 1..1096 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:19 Download gff for
FMO07677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3021-RA | 96..1191 | 1..1096 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:19 Download gff for
FMO07677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1026886..1027546 | 1..662 | 99 | -> | Plus |
| X | 1027635..1028069 | 663..1096 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:02 Download gff for
FMO07677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 920919..921579 | 1..662 | 99 | -> | Plus |
| arm_X | 921668..922102 | 663..1096 | 96 | | Plus |
