FMO07681.5prime Sequence
840 bp (840 high quality bases) assembled on 2008-11-03
> FMO07681.5prime
CAGTCGACATGCGTCGCAATGCGCGCCAACAACAACACAATCAGGAAGAA
ATCGGCCCCGACGACGTGGAAGACATCTTTGCCCGTCCCGCCTACGATGA
CGACGAGTTCGAAGATCTGCTCCCTCTGGCCAGGAGGCCCAATGGCCACG
CCCGACTCGGCCGCTACGAGAACACTCTGGAGGTAAAGGTCCAAGAGGGA
GACACACTCCAGGCGCTGGCCCTGCGCTTTCACTCCTCTGTGGCGGACAT
CAAGCGCCTGAACAAGATCGACCGCGAAAATGAAATCCACGCACATCGGG
TTATTCGCATTCCGGTTACAGTGCACAACGTCCTGCTGGGCAACGGGGGC
CTCGAAGCCCTTCCTGCGGTCCACCGCAGCGGGAACAACAGTCCTAGACA
CAATATTGAGCGGGAACCAGCTCCCGAACGCAATCCCCTCGAGGATGCGC
GGCAAATGCTGGATGAGCGACTCCTGGTGGCGGCGGTAAATGCTTCAGGC
GCCGTGGATCACGAGAAACCATCGACGAGCAGAGCTGCTGGACAATTCTA
CGAGGGAGCCCAGGGTGCGCCGAATGACGAAGCCAATATGGAGCAACCCT
ACGAGGAAAATGCCGCTCTGCTTAACCACATGGTGGACAGGCACGCTCCG
CTAGTGCGTCCCATCCCTGGACCCTCTTTGAGTGCCATCGACTGGTCCGG
ATCGGACTGCGACTTGTCTTGGATATGTCTGCTGATCTTCATACTCGCCT
TGTGTGTCGTCATACCCTTGGTCTACGTCATCTACCTAGCAGAGCATCCA
CATCACAACCATAGTGCCCAGGCAAGCTTTCTAGACCATT
FMO07681.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17985-RA | 1479 | CG17985-RA | 177..989 | 9..821 | 4065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7654478..7655037 | 582..23 | 2800 | 100 | Minus |
| 2R | 25286936 | 2R | 7652115..7652355 | 821..581 | 1205 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:35:40 has no hits.
FMO07681.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:09:12 Download gff for
FMO07681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17985-RA | 186..1003 | 9..829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:05 Download gff for
FMO07681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17985-RA | 177..994 | 9..829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:40 Download gff for
FMO07681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17985-RA | 177..994 | 9..829 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:40 Download gff for
FMO07681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7652110..7652353 | 583..829 | 98 | <- | Minus |
| 2R | 7654478..7655037 | 23..582 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:05 Download gff for
FMO07681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3539615..3539858 | 583..829 | 98 | <- | Minus |
| arm_2R | 3541983..3542542 | 23..582 | 100 | <- | Minus |
