FMO07684.5prime Sequence
1194 bp (991 high quality bases) assembled on 2008-11-03
> FMO07684.5prime
CAGTCGACATGCCGCTCTTCACAAGAAAATCACCCAAGCAAGGACCCACC
TCGGATGGGGGCTCCCAGTTCGGCAGTCGCTCCTCCATGAACTCCGGGTC
CTCCCAGGGCAGCCACATTAGCAATAACAACAACAACAGCATTCCGGAGA
AAACAAAGCCCCCGCTGGTCTTCCACTGCCAACTGGCCCACGGCAGTCCC
ACCGGTCTAATCCACGACTTCTCCAGCGTTCGAGAGCTGTACCAGAAGAT
TGCCGAGTGCTTTGACATATCCGAGAAGGACATTCTCTTCTGCACCCTCA
ACTCGCACAAGGTGGACATGACGCGTCTGCTGGGCGGGCAGATCGGGCTG
GACGACTTTATATTCGCCCATCGCAAAGGTCGGCCCAAGGAGATCGAGAT
TGTGAAGTCGCAGGATGCCCTCGGACTGACGATCACCGACAACGGGGCCG
GCTACGCCTTCATAAAGCGGATCAAGGAGGACTCGATCATCGATCGCATC
GAGCACATCAGCGTTGGCGATCACATCGAGAAGCTCAACGGCCAGAATAT
GGTGGGCAAGCGGCACTACGAGGTGGCGCGCATGCTGAAGGACATTGCCA
CCGGGGAGACCTTCACCCTGCGCCTGGTCGAGCCAGTGCGAAGCGGCTTC
CAGGGCATCGGACCGCGCAGCCAGTCAAGGGCGTCGGGCTCGGCCGGAGG
AAAGAACTATGGCAGCGGCAAGGAGACGCTGCGGTTCAAGGCCAATGGCA
ATGCCCAGATCGAGCCGCAGTTCGATGAGGCGACTGTGGCCGGTATCGAG
GCATTAATAACCTGCTGGAGTCTTTCATGGGCATCAACGACACGGAGCTG
GCGTCCCAGATCTGCGGACTTGGGCGACCAAAGTCCAACTCAATGGACTT
CGCCGAGGCCATCGACAACTCGGACCTAGAGTCCGTTCGGCTTCACGGAT
GACTTCATCATCGGAGCTGTGGGGGTGCCATAACGGATGCCCGGCGCAGT
CCACGAACAGTCCCCAAGCAAGCTTTTCTAGACCATTCCGTTTGGGCGCG
GGCCCAGGTAATGGTCTTAATCATAATCCATAATCATATTCTATTCACAC
TAGCCTAGGAGAATCTTGTCATGACTATGCTGAATTCCACAATAACAACG
CGGGCCGCCATCCGAGCGGTCTTGACACAATCTCGATAGTGGGA
FMO07684.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
kermit-RE | 1661 | CG11546-RE | 295..1300 | 8..1014 | 4830 | 99 | Plus |
kermit-RC | 1722 | CG11546-RC | 356..1361 | 8..1014 | 4830 | 99 | Plus |
kermit-RD | 1606 | CG11546-RD | 240..1245 | 8..1014 | 4830 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8147279..8148284 | 1014..8 | 4655 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:36:25 has no hits.
FMO07684.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:09:25 Download gff for
FMO07684.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kermit-RD | 198..1217 | 1..1021 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:41 Download gff for
FMO07684.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kermit-RD | 232..1251 | 1..1021 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:42 Download gff for
FMO07684.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
kermit-RD | 232..1251 | 1..1021 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:42 Download gff for
FMO07684.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8147296..8148292 | 1..998 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:41 Download gff for
FMO07684.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4034801..4035797 | 1..998 | 99 | | Minus |